KEGG   Rickettsia rickettsii Sheila Smith: A1G_04880
Entry
A1G_04880         CDS       T00604                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
rri  Rickettsia rickettsii Sheila Smith
Brite
KEGG Orthology (KO) [BR:rri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rri03032]
    A1G_04880 (gyrB)
   03400 DNA repair and recombination proteins [BR:rri03400]
    A1G_04880 (gyrB)
Enzymes [BR:rri01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     A1G_04880 (gyrB)
DNA replication proteins [BR:rri03032]
 Prokaryotic type
  DNA Topoisomerases
   A1G_04880 (gyrB)
DNA repair and recombination proteins [BR:rri03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      A1G_04880 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook GyrB_insert HATPase_c_3
Other DBs
NCBI-ProteinID: ABV76476
UniProt: A0A0H3AX16
Position
complement(823271..825694)
AA seq 807 aa
MSEIEKKFNESSYGADSIKVLKGLEAVKKRPGMYIGDVGDGSGLHHMIYEVVDNAIDESL
AGYCDLVRVTLNKNGSVTVSDNGRGIPVEIHEEEGISAAEVIMTQLHAGGKFDQNAYKVA
GGLHGVGVSVVNALSEWLELRIWRNNKEYLMRFNNGITEAPLAVVKENIDKKGTEVTFFP
SVETFTNIEFDFGTIEHRLRELAFLNSGVKILLVDNRFEEVKEVEFYYTGGIEAYVKYID
RAKHAIHPCIVVNTENAESGISLELAMHWNDSYHENILCFTNNIRQRDGGTHLSAFKSAI
TRVITSYLDTTGLNKKAKNYFSGEDTREGLCCVLSVKVPDPKFSSQTKDKLVSSEVRPVV
ENAVYTKVLEWFEEHPAEAKAIIAKIMEAANAREAARKARELTRRKSALEVSNLPGKLAD
CHAKDPAISELFIVEGDSAGGTAKQGRDSKIQAILPLRGKILNVERARFDKMLGSDQIGT
LITALGISVEREFSLEKLRYHKVIIMTDADVDGSHIRTLLLTFFYRHMPALINKGYLYIA
QPPLYKVKKGAAEFYLKNEQALQDYLIKSTINDATLILDDKEQLVGDNLEELINKVVKFN
GLLDHASKKFNRSITEILAINDLLNNKIFDPESDLRLKKALDVLNSLEDSPDKTNWEVLK
HENKIEFFRFSRGLKESKILLKEQLESFEFVQISKLALTIFDIFSKQLKLIVKSQEFDIL
TPSQLLNTIIECGKRGINIQRFKGLGEMNSDQLWETTLDPTKRTLLQVRVAEIDEAEGIF
STLMGDVVEPRRLFIQANALNVVNLDV
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgtcggaaattgaaaaaaaatttaacgaatcatcatacggtgctgattccataaaggtt
ttaaaaggtcttgaagccgtaaaaaaaagaccgggaatgtatatcggggatgttggagac
gggtcgggtctacatcatatgatttatgaagtagtcgacaacgctatcgatgagtcgctt
gctggttattgcgatctagtacgagtaacattaaataaaaacggttcagtaaccgtatcc
gataacgggcgaggtatacccgttgaaattcatgaagaagaaggaatatcggcagctgaa
gttattatgactcaacttcacgcaggcggtaagtttgaccagaacgcttataaggttgca
ggcggtctacacggtgttggtgtatcggttgtaaatgctctttctgaatggcttgagctg
cgtatttggcgtaataataaggaatatttgatgagatttaataatggtataacggaagct
ccgcttgcggttgtcaaagaaaatattgataaaaaaggtacggaagttactttttttccg
tctgtagaaacgtttactaatatagaatttgattttggcactatagagcatcgtcttcgt
gagcttgcttttttaaattcaggcgtaaagattttactcgtcgataatcgctttgaagaa
gtgaaagaagtagagttttattatacgggcggtatagaagcttatgtaaaatatatagac
agagcgaagcacgctatccatccatgtatagtagttaatacggagaatgctgagtccggt
ataagccttgagcttgcgatgcattggaacgattcttatcatgaaaatattttatgcttt
actaataatattaggcagcgtgatggcggaactcatcttagtgctttcaaatcagcgata
acacgtgttattacctcgtatcttgatactacgggtcttaataaaaaagctaaaaattac
tttagcggtgaagatactagggaagggctatgttgtgtgctttccgttaaagtccctgat
cctaaattctcttctcaaacaaaagataagctagtaagctccgaagtacgaccggttgtt
gagaatgccgtttatacaaaggttcttgagtggtttgaagagcatccagcagaagctaag
gcaattatagctaagattatggaagctgcgaatgctcgtgaagctgctagaaaagcaagg
gaactcactcgaagaaaatcagctttagaagtttcgaatttaccaggtaaacttgcagat
tgccatgcaaaagatcctgctatttcagaattgtttattgttgagggggactctgcgggc
ggtactgcaaagcagggtagggatagcaaaattcaggctatattgcctttgcgtggtaaa
attttgaacgttgaacgtgcaagatttgataaaatgctcggttcggaccaaatcggtacg
ttaattacagcgcttggaattagtgttgaacgagaattttccttagaaaagcttagatac
cataaagttattattatgactgatgctgatgttgatggctcgcacattagaactttatta
ctcacgtttttctatcgtcatatgcctgcgctaataaataaaggctatctatatatagct
cagccaccgctttataaagtaaagaaaggagcagccgagttttatttaaagaatgagcaa
gcgctgcaagattatttgatcaaatcaactattaatgatgcaaccttaattctagacgat
aaagagcagttagtgggtgataatttagaagagctaattaataaagtggttaagtttaac
ggcttacttgaccatgctagcaaaaaatttaatcgctcaattaccgaaattcttgctatt
aatgacttacttaataacaaaatatttgatcctgaaagtgatttaagacttaaaaaagct
ttagatgttttaaatagcttagaagattcgcctgataagactaattgggaagttttaaaa
catgaaaataaaatagagttcttccgctttagtaggggtttaaaagaaagtaaaatatta
ttgaaagagcagttagaatcatttgagtttgtacaaatatcaaagcttgctttaacgatt
tttgatatatttagtaagcaattaaagcttatagtgaaaagtcaggaattcgatatttta
acaccgagtcagttgttaaataccattatagaatgcggaaaaagaggtataaatattcag
cgttttaagggtcttggtgagatgaattccgaccagctatgggaaactactcttgaccct
acaaaaagaactttgcttcaggtaagagttgcagaaattgatgaagcagaaggcattttc
tctactttaatgggtgatgttgttgaacctcgcaggttatttatccaagcaaatgcgttg
aatgtcgtgaatttggatgtgtag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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