KEGG   Rickettsia rickettsii Morgan: RRM_06190
Entry
RRM_06190         CDS       T03662                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
rrm  Rickettsia rickettsii Morgan
Pathway
rrm03030  DNA replication
rrm03430  Mismatch repair
rrm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rrm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RRM_06190
   03430 Mismatch repair
    RRM_06190
   03440 Homologous recombination
    RRM_06190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rrm03032]
    RRM_06190
   03400 DNA repair and recombination proteins [BR:rrm03400]
    RRM_06190
Enzymes [BR:rrm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RRM_06190
DNA replication proteins [BR:rrm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RRM_06190
DNA repair and recombination proteins [BR:rrm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RRM_06190
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: AJG34859
Position
complement(1107958..1111503)
AA seq 1181 aa
MRPEFIHLRTQSSYSFLESALTIEKVVELASSNKMPAICLADKGNLFGSLEFALCAVKKG
LQPIHGVILNIKYDIDIFAQILLIAKDETGYKNLLKLSSLTFTKNDRKICDHINFEDLIE
YQEGLIGLCCYTDGIVGKCLLARNEEQAMLFARKLQEILGDRFYFEIMRHELPEEQFIED
SYIRIAAELAIPLVATNKVLFSEKSMHDAHDVLLCISAGVTKEYLDRKTVSENCYFRSPH
EMIELFSDLPSAIQNTVNLRERCYFAAHANPPMLPNFATKDISETDLIKKDATEGLLARL
AAKFKSENIALENQEALKTEYFARLNYELDIICNMNFAGYFLIVSDFIKWSKKEGILVGP
GRGSGAGSVVAWSLLITDLDPIKFGLLFERFLNPERISMPDFDIDFCQERREEVINYVRS
KYGNNRVGQIITFGKMQAKAVIKDVARVLSLPYKFADYLTELVPFSAVNPVSLEQAMREV
PELANAAKGNGLYNLDGEAELIKLVIDTSLILEGLHRHSSTHAAGIVIAGTDLVDIVPVY
KDSNSDMLVVGYSMKYSEIAGLIKFDFLGLQTLTVITDCKKLLKEQGIEVDFNNMTFDDN
KTYQMLCKGKGVGVFQFESIGMKDALRRLKPDSIHDLIALGALYRPGPMENIPTYIACKH
KLQQPDYLHELLKPILEETYGVVIYQEQVQRIAQVLAGYTLGAADLLRRAMGKKIKKEME
EQEEIFVKGAIANNISESQAKSIFATVAKFAGYGFNKAHAASYGVISYQTAYLKANYPAE
FLVACLNLELNNHDKINLFLQEAKDNGIKIIAPNINISEGYFSVQFSDTVIPHSVKPVIP
RLDRGIQEISKDTVVKPRYNIAGAIIFALGAIKGVTPNFGKLVTDERKARGAFKSITDFI
ERLPPKSINSKLLENLIKSGCFDELHDNRLQLLSSIPKLLSYSTAYHEEQESNQFSLIKV
SSLSPTILVSSDYADKNTLAFYEFEAMGLFISNHPLTEYQEIFSRLNILNTADLHNNLPD
GTNRVNLAGVIQKKDSRMSARGRFVTLVLSDPENIFELSIFSEEVLKDYVHLLDVKSLVV
VNCDIVKDEGGIKLTAKSFSSIEDAINNKQFELQFYPQNHEELRQIVNLLAARINNEDQS
NAKATIYLQSADVKNFVAKITLPEKFLLQGQDFEILKGYSK
NT seq 3546 nt   +upstreamnt  +downstreamnt
atgcgacctgaatttattcatttaagaactcaaagctcttattcttttctagaaagtgca
ttaacgattgagaaggtagtagaacttgcttcatcgaataaaatgcctgctatttgtttg
gcagataagggaaatttattcggctcattagagtttgcattatgtgcagtaaaaaaagga
ctgcagccgatacacggagttattctaaatataaaatacgatatagatatttttgctcaa
attttgcttatagctaaagatgaaactggttataaaaatttactcaaactatcaagcctt
acttttactaaaaatgatcgtaagatatgcgatcatattaattttgaagatttaatcgaa
tatcaagaaggattaataggattatgctgttataccgacggtattgtcggaaaatgcttg
ctagctcgcaacgaggagcaagcgatgctgtttgcacgtaaattacaggaaattttagga
gatcgtttttactttgagattatgagacatgagctaccggaagaacagtttattgaggat
agttatattagaattgctgccgagcttgctattccgcttgttgctactaataaagttttg
tttagtgagaaaagcatgcatgatgcacatgatgtattgttatgtatatcagccggtgtt
actaaagaatatctggatcgaaaaacagttagcgaaaattgttattttagatcaccgcat
gagatgatagagcttttttccgatttacctagtgccatccaaaataccgtgaatttaaga
gagcgttgttattttgccgcacatgcaaacccgccgatgctgcctaattttgccaccaaa
gatattagtgaaacggatttaattaaaaaagatgcaacagaagggttgcttgcaaggctt
gctgcaaagtttaaatctgaaaatattgcgttagagaatcaagaagcattgaaaaccgaa
tattttgctcgtcttaattatgagctggatattatctgtaatatgaattttgccggttat
tttttgattgtatcggattttattaaatggagtaaaaaagaggggattttagtcggaccg
ggtagaggatcgggagcaggctcggttgttgcttggagcttgcttattactgatcttgat
ccgattaaatttggcttattatttgaaagatttttaaatcctgaacgtatttcaatgcct
gattttgatattgatttttgtcaggaaaggcgtgaggaagtaattaattacgtacgttcc
aaatacggtaataatagagtaggacagattataactttcggtaagatgcaggcaaaggct
gtaattaaggatgtcgctcgtgtgcttagcttaccttataaattcgctgattatctaacg
gagcttgtcccttttagtgcagttaatccagttagcttagaacaggcaatgcgtgaagtt
ccggagcttgcaaatgccgctaaaggtaatgggttgtataatttagatggtgaagcggag
ttaattaagttagtgattgatacttcgttaattcttgaggggctgcataggcattcctca
actcatgctgcaggaatcgtaatagcaggtactgatttagtcgatatagtaccggtatat
aaagattctaactccgatatgctggtagtcggttattctatgaaatattccgagattgcc
ggtttaattaaatttgattttttagggctacaaaccctaacggttattaccgattgtaag
aaactgcttaaagagcaagggatagaagtagattttaacaatatgacgtttgatgataat
aagacttatcaaatgttgtgtaaaggtaaaggagtaggcgttttccaatttgaaagtatc
gggatgaaagatgcacttagacgccttaaacctgattctatacatgatttgatagctctt
ggtgcgttataccgtcctggtcctatggaaaatattcctacctatatagcttgtaagcat
aaattacaacagcctgattatttacatgagctattgaaaccaatcttagaagaaacttac
ggagtggtgatatatcaggagcaggtacaaagaattgctcaggttcttgcaggttatacg
ctaggagctgccgatttacttcggagagcaatgggtaagaagataaaaaaagaaatggag
gagcaggaagaaatttttgttaaaggagcaattgctaataatatttcagaatctcaagct
aaatccatttttgcgaccgtggctaaatttgccggatacggttttaataaggcacatgct
gcgtcttacggtgttatttcataccaaactgcatatcttaaagctaattatcctgctgaa
tttttagtagcatgcttaaatcttgaattgaataatcacgataaaattaatttattttta
caagaagcaaaagataacggcataaaaattattgcacctaatattaatatttctgaaggg
tattttagtgtacagttttcggacactgtcatcccgcatagcgtaaagcctgtcataccg
cgacttgatcgtggtatccaggaaatttcaaaagataccgtggtcaagccacggtataac
atcgcgggtgcaataatcttcgccttaggtgctattaagggagttacgccgaatttcggt
aagttagtaacggatgagcgaaaagcaagaggggcgtttaaatcaattactgattttatt
gaaagattacccccaaaatctattaacagtaaattattggaaaatttaatcaagtcaggc
tgttttgatgagctgcatgataatcgattgcaattattgtcaagcattccaaaattgctt
tcttattcaactgcatatcacgaagagcaggaatctaatcaatttagcttaattaaagtt
tctagtttaagtccaactattttagtatcaagcgattatgccgataaaaatactttagcc
ttttatgaatttgaggctatgggtttatttatctctaatcatcctcttacggaatatcaa
gaaatatttagtcgtttaaatattttaaatactgcggatttgcataataacttacctgat
ggtactaaccgagtaaatcttgccggtgtaatacaaaaaaaggattcccgtatgtcggca
agaggtaggtttgtgacgcttgtgctttccgatcctgagaatatctttgaacttagtatt
tttagtgaggaagttttaaaagattatgtacatttacttgatgttaaaagtttggtagtt
gttaattgtgacatagttaaagatgagggaggaataaaactaacggcaaaaagcttttca
tcaattgaggatgcaattaataataaacaatttgaactacagttttatccacaaaatcat
gaagaattacggcagatagtaaacttgcttgcagctcgtataaataatgaagatcagagt
aatgctaaagctacaatctatttacaaagcgcagatgtaaagaattttgtagcaaaaatt
acattacctgaaaaattcttgctccaagggcaagattttgagattttaaaaggatatagt
aaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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