KEGG   Rhinopithecus roxellana (golden snub-nosed monkey): 104682555
Entry
104682555         CDS       T03989                                 
Symbol
APOBEC3B
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3B
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
rro  Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03250  Viral life cycle - HIV-1
rro05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:rro00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    104682555 (APOBEC3B)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    104682555 (APOBEC3B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rro03019]
    104682555 (APOBEC3B)
Messenger RNA biogenesis [BR:rro03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104682555 (APOBEC3B)
SSDB
Motif
Pfam: NAD2 APOBEC2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 AID dCMP_cyt_deam_1
Other DBs
NCBI-GeneID: 104682555
NCBI-ProteinID: XP_030771671
Position
13:complement(2133653..2144763)
AA seq 382 aa
MNPQIRNPMERMYQHIFYYNFENEPILYGRSYTWLCYEVKIRKDPSKLPWDTGVFRGQVY
SEPEHHAEMYFLSWFCGNQLPAYKRFQITWFVSWTPCPDCVAKVAEFLTEHPNVTLTISA
ARLYYYRGRDWRRALCRLRQAGARVKIMDYEEFAYCWENCAYNEGQPFMPWYKFDDNYAF
LHRKLKEILRHLMDPDMFTFNFNNDLSILGRHQTYLCYEVEHLDNGTWVPMDQHWGFLCN
QAKNPLHGVDGCHAELCFLDQVPSWQLDPAQMHRVTWFISWSPCFSWGCAEQVRAFLQEN
THVRLRIFAARIYDYDPLYQEALRTLRDAGAQVFIMTYEEFEYCWDTFVDRQGCPFQPWD
GLDEHSQALSGRLRAILQNQGN
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgaatccacagatcagaaatccaatggagcggatgtatcaacacatattctactacaac
tttgaaaatgaacccatcctctacggtcggagctacacctggctgtgctacgaagtgaaa
ataaggaaggacccctcaaagctcccttgggacacaggggtctttcgaggccaggtgtat
tctgagcctgagcaccacgcagaaatgtacttcctctcttggttctgtggcaaccagctg
cctgcttacaagcgcttccagatcacctggtttgtatcctggaccccctgcccggactgt
gtggcgaaggtggctgaattcctgactgagcaccccaatgtcaccctgaccatctccgcc
gcccgcctctactactaccggggtagagattggcggagggcgctctgcaggctgcgtcag
gcaggggcccgagtgaagatcatggactatgaagaatttgcatactgctgggaaaactgt
gcgtacaatgaaggtcagccattcatgccttggtacaaatttgatgacaattatgcattc
ctgcaccgcaagctaaaggagattctcagacacctgatggatccagacatgttcactttc
aactttaacaatgacctttcgatccttggacggcaccagacctacttgtgctacgaggtg
gagcacctggacaatggcacctgggtcccgatggaccagcactggggatttctatgcaac
caggctaagaatcctctccatggcgttgatggctgccacgcagagctgtgcttcctggac
caggttccttcttggcagttggacccggcccagatgcacagggtcacttggttcatctcc
tggagcccctgcttcagctggggctgtgccgagcaagtgcgtgcgttccttcaggagaac
acacacgtgagactgcgcatcttcgctgcccgcatctatgattacgaccccttgtatcag
gaggcactgcgaacgctgcgggatgctggggcccaagtcttcatcatgacctacgaggaa
tttgagtactgttgggacacctttgtggaccgccagggatgtcccttccagccctgggat
ggactagatgagcacagccaagccctgagtgggaggcttcgggccattctccagaatcag
ggaaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (23)   

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