KEGG   Roseiflexus sp. RS-1: RoseRS_0078
Entry
RoseRS_0078       CDS       T00542                                 
Name
(GenBank) lysyl-tRNA synthetase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
rrs  Roseiflexus sp. RS-1
Pathway
rrs00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rrs00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    RoseRS_0078
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rrs01007]
    RoseRS_0078
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rrs03016]
    RoseRS_0078
Enzymes [BR:rrs01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     RoseRS_0078
Amino acid related enzymes [BR:rrs01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   RoseRS_0078
Transfer RNA biogenesis [BR:rrs03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    RoseRS_0078
 Prokaryotic type
   Other AARSs
    RoseRS_0078
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d MAP3K_TRAF_bd
Other DBs
NCBI-ProteinID: ABQ88519
UniProt: A5UPG6
Position
92787..94256
AA seq 489 aa
MELNELQQQRLAKLERLRAAGIDPYPPRTRRTHTIGFVLASFDQLMERGEQVTVAGRIVG
ARRILGKLAFAHIEDESGRIQIWLSRGDIGDEWFDRFRDDLDTFDIVEATGTLRRTQRGE
PSVFVERLGVLAKSLNPPPEKWHGLSDIEERHRQRYLDLIVNPEVRDVFRTRAKIVSTMR
RFLDERGFLEVETPTLQPIYGGASARPFITHHNQLKQDLYLRIAVELYLKRLIVGGFERV
YEISKVFRNEGVDRTHNPEFTMMECYQAYADYNDMMRLVEDLYRTLALEVAGSTTIVFQG
HTIDFGPAWQRVSIPTAIAARTGIDILELTELEPLQRAIRAVGLKVDLKPSWGKQVDEIF
SVYVQPELIQPTFVIDHPVALSPLAKRRPDQPLLVERFEPIVAGMEVGNAFTELNDPLDQ
EQRFLEQGRAYDAGDDEAQQMDIDFLNALMYGMPPTGGLGIGIDRTVMLFTDQPSIREVI
LFPHMRPRD
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggaactcaacgaacttcaacaacagcgcctggcaaaactggaacgcttgcgcgcagcc
ggcatcgacccgtatccgccgcgtacccggcgcacccatacgattggcttcgtgcttgcc
agtttcgaccagttgatggaacgcggagaacaggtcaccgtcgccgggagaattgtgggc
gcccgtcggattctgggcaaactggcatttgcccacatcgaagacgagtcgggccgcatc
cagatctggctcagtcgcggcgacatcggcgacgaatggttcgaccggtttcgcgatgac
ctcgatacgttcgacattgtcgaagccacgggaacgttgcgccgcacgcaacgcggcgag
ccttcggtgttcgtcgagcgcctgggggtgctggcaaaatcgctcaacccgccgccggaa
aagtggcatggtctttcggacatcgaagagcgtcatcgtcaacgctacctcgacctgatc
gtcaaccctgaagtgcgcgacgtgtttcgcacacgcgcgaagatcgtcagcacaatgcgg
cgcttccttgacgaacgcggctttcttgaggtggagacgccaaccctgcaaccgatctac
ggcggcgcttcggcccgcccgttcatcacgcaccataaccagttgaagcaggatctctat
ctgcgcatcgccgtcgaactctacctgaagcgcctgatcgtcggcggctttgagcgcgtc
tatgagatcagcaaggtttttcgcaacgaaggggttgatcgtacccacaaccctgagttc
acgatgatggaatgttaccaggcgtatgccgattacaacgatatgatgcgcctggtcgaa
gacctgtaccggaccctggcgctggaagtcgctggcagcacaaccattgtctttcaggga
cacactatcgatttcggtcctgcgtggcagcgtgtttcgatcccgacggcgattgccgcg
cgcaccggcatcgacattctcgaactcaccgaactcgaaccgttgcaacgagcgatccgc
gcagtcgggctgaaggtcgatctcaaacccagttggggcaaacaggttgacgagatcttt
agcgtttatgtgcaaccagaattgatccagccaacgttcgttatcgatcatccggtggcg
ctgtcgccgctggcgaaacgtcgtcccgatcaaccgctgctggtggaacgcttcgagcca
atcgtggctggcatggaagtcggcaatgcgtttaccgaattgaacgatccgctcgaccag
gagcagcgttttctggaacaggggcgcgcgtatgatgctggcgacgatgaagcgcaacag
atggacattgacttcctcaatgcgctgatgtatggtatgccgccaaccggcgggttaggc
atcggtatcgaccggacggtgatgctgttcaccgatcaaccgagcatccgcgaagtcatc
ctgttcccgcacatgcgtccgcgtgattga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

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