KEGG   Roseiflexus sp. RS-1: RoseRS_0389
Entry
RoseRS_0389       CDS       T00542                                 
Name
(GenBank) Glycine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
rrs  Roseiflexus sp. RS-1
Pathway
rrs00260  Glycine, serine and threonine metabolism
rrs00460  Cyanoamino acid metabolism
rrs00630  Glyoxylate and dicarboxylate metabolism
rrs00670  One carbon pool by folate
rrs00680  Methane metabolism
rrs01100  Metabolic pathways
rrs01110  Biosynthesis of secondary metabolites
rrs01120  Microbial metabolism in diverse environments
rrs01200  Carbon metabolism
rrs01230  Biosynthesis of amino acids
rrs01240  Biosynthesis of cofactors
Module
rrs_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:rrs00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    RoseRS_0389
  09102 Energy metabolism
   00680 Methane metabolism
    RoseRS_0389
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RoseRS_0389
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    RoseRS_0389
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    RoseRS_0389
Enzymes [BR:rrs01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     RoseRS_0389
SSDB
Motif
Pfam: SHMT Beta_elim_lyase Aminotran_1_2 DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: ABQ88820
UniProt: A5UQB7
Position
491976..493286
AA seq 436 aa
MSTLQTLWRSDPAVARIIDGEMRRQRDGLELIASENYASRAVMEAQGSALTNKYAEGYPG
ARYYGGCEWVDQVEDLARERVKELFGAAYANVQPHSGSQANMAVYFTFLRPGDKVLGMNL
AHGGHLTHGSPVNFSGQLYTFVAYGIDPKTERIDYEQVAEIAHRERPKMITVGASAYSRA
IDYAVFRQIADDVGAFLFADIAHPAGLIAKGLLPSPIKYAHVVTSTTHKTLRGPRGGIIL
MGEDFENPFGLKAAKSGRTLMMSELLDKMVIPGVQGGPLMHVIAAKAVGFGENLQPEFET
YARQVIRNAQTLANALIARGYHVLSGGTDNHLMLIDLRNKAVSGKAAQEALDRAAITTNK
NAVPNDDKSPLITSGIRLGTPALTTRGMKEPEMEQIAALIDDVITHINDDHVINRVREEV
MALCARFPVPGLEPST
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgtctacgcttcagacgctctggcgcagcgatccggcagtggcgcgcatcatcgatggc
gaaatgcgccgccagcgcgacggattggaactgatcgccagcgagaattatgccagccgc
gctgtgatggaagcgcagggttcggcgctgacgaacaaatatgccgaagggtacccgggc
gcacgctactatggcggatgtgaatgggtcgatcaggtggaagacctggcgcgtgagcgg
gtcaaggagttgttcggcgcggcgtatgccaacgtccagccgcactccggatcacaggcg
aatatggcggtttatttcacgttcctgcgtcccggcgataaagtgctcggcatgaacctg
gcgcacggcgggcacctgacccatggatcgccggtgaacttttcgggtcagttgtacacc
ttcgtggcatacggcatcgacccgaagaccgagcgcatcgattatgagcaggtcgccgag
attgcgcaccgcgagcgcccgaagatgatcacggtcggcgcaagcgcctattcgcgcgcc
atcgactatgccgtatttcgccagatcgccgatgatgtcggcgcattcctcttcgccgac
attgcgcatccggcggggttgatcgccaaagggttgctgcccagccccatcaagtatgcg
catgtcgtgacatcgaccacccataagacactgcgcggaccgcgcggcggcatcatcctg
atgggagaggatttcgagaacccgtttgggttgaaagcggcgaagagcggtcgcaccctg
atgatgtcggaactgctcgacaaaatggtcatccccggtgttcagggcggcccgttgatg
cacgtcatcgctgccaaggcggttggatttggcgaaaacctgcaacccgaattcgagacc
tacgcacgccaggtgatccgcaacgcgcagacgctggcgaatgcgctgatcgcgcgaggg
tatcacgtgctctccggcggtaccgacaatcacctgatgctgatcgatctgcgcaacaag
gcggtcagcggcaaagcggcgcaggaggcgcttgatcgggcggcgattacgaccaataag
aatgctgtgccgaacgatgacaaatcaccgctgatcaccagcggcattcggttgggaacg
cccgccctgacaacgcgtggcatgaaagagccggagatggaacagatcgccgcgctgatc
gatgatgttatcacgcacatcaatgatgatcatgtgatcaatcgcgtgcgcgaagaggtg
atggcgctctgtgcgcgctttcccgtgcctggtctggaaccgtccacctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (46)   

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