KEGG   Rhodococcus rhodochrous: 4535765_02969
Entry
4535765_02969     CDS       T05521                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
rrt  Rhodococcus rhodochrous
Pathway
rrt00470  D-Amino acid metabolism
rrt00550  Peptidoglycan biosynthesis
rrt01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rrt00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    4535765_02969 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    4535765_02969 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rrt01011]
    4535765_02969 (murD)
Enzymes [BR:rrt01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     4535765_02969 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:rrt01011]
 Precursor biosynthesis
  Amino acid ligase
   4535765_02969 (murD)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C MurD-like_N AlaDh_PNT_C 2-Hacid_dh_C TrkA_N NAD_binding_7 Shikimate_DH XdhC_C ADH_zinc_N Pyr_redox 3HCDH_N
Other DBs
NCBI-ProteinID: SNV21051
Position
1:complement(3195406..3196896)
AA seq 496 aa
MNDELERLRGRAVLVAGAGVSGRATIEPLTDLGAHVTVTDRNERALAECAALGARTVDLD
SLVDDPAALREFALVVTSPGFPPDAPLLSRAAGAAIPIWGDIELSWRIDRAEVYGPARRW
LVVTGTNGKTTTTMMLQAILEAAGLGSVACGNIGLSVLDALRRDEPRADVLAVELSSFQL
HWAPSVRPEAGVVLNIAEDHLDWHGGIENYIEAKLGALTGAVGVIGLDDPIAGGLGDRSR
AVVTVGFTLGYPQEGELGISGELLVDRAFADSAVLARVDDVTPPGPAGLSDALAAAALAR
AIDVPASAVHDGLRRHRVGPHRAAPVGQVDGVEYIDDSKATNPHAARSSLLARDRVVWIA
GGLLKGARVDDLVAEVAPRLSGAVLLGRDAGEIADALARHAPQVPVVVVDTGDDEAMTDA
TSETDTASVRRVAAPGADGPAAMRVAVREAAALASPGETVLLAPAAASLDMFADYAERGR
SFASAVEELRGGGTQP
NT seq 1491 nt   +upstreamnt  +downstreamnt
gtgaacgacgaactcgaacggctcagaggacgggcggtgctcgtcgccggggcaggggtc
tccggccgcgcgacgatcgaacccctcaccgatctcggcgcccacgtcaccgtcaccgac
cgcaacgagcgcgcactggccgagtgcgcggcgctcggcgcccggacggtcgacctcgac
agcctcgtcgacgaccccgctgcgctgcgcgagttcgccctggtggtcacgagtcccgga
ttcccgcccgacgccccgctgctctcgcgcgcggccggcgcggcgatccccatctggggc
gacatcgaactgtcctggcgcatcgaccgcgccgaggtctacggaccggcccgtcggtgg
ctggtcgtcaccgggacgaacggcaagaccaccacgaccatgatgctgcaagcgatcctc
gaggccgccggtctcggcagcgtcgcgtgcggcaacatcggtctttccgtgctcgacgcc
ctgcgccgcgacgaaccgcgggccgacgtcctcgccgtggagttgtcgtccttccagctg
cactgggcgccctcggttcggcccgaggccggtgtcgtgctcaacatcgccgaggaccat
ctcgactggcacggcggcatcgagaactacatcgaggccaaactcggtgccctcaccgga
gccgtcggggtcatcggtctcgacgacccgatcgccggtggtctcggcgaccggtcccgt
gccgtggtcaccgtgggcttcaccctgggctatccgcaggaaggcgaactcgggatcagt
ggcgaactgctcgtggatcgggcgttcgccgattccgccgtgctcgcccgggtggacgac
gtgacgccgcccggccccgccggactgtccgatgcactcgcggccgccgccctcgcccgg
gccatcgacgtgcccgcctcggcggtgcacgacggcctgcgacggcaccgcgtgggcccg
caccgcgccgcgcccgtggggcaggtcgacggcgtcgagtacatcgacgactcgaaggcg
accaatccgcacgcggcccgcagttcgctgctcgcccgcgaccgcgtggtgtggatcgcc
ggtggtctgctcaagggcgcccgggtggacgacctggtcgccgaggtggcaccgcgactg
tccggagccgtgctgctcggccgcgacgccggcgaaatcgccgacgcgctggcgcgacac
gccccgcaggtcccggtcgtcgtcgtggacacgggcgacgatgaagcgatgaccgatgcg
acgagcgagaccgacaccgcctcggtgaggagggtcgcggcgccgggcgccgacggcccc
gccgctatgcgcgtggcggtccgggaagcggccgctctcgcctcgccgggggagacggtg
ctgctcgcgccggccgcggcatcgctcgacatgttcgccgattacgccgaacgcggcagg
agcttcgcgtccgcggtcgaggaactccgcgggggcgggacgcaaccgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (30)   

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