KEGG   Rhodospirillum rubrum ATCC 11170: Rru_A0002
Entry
Rru_A0002         CDS       T00310                                 
Name
(GenBank) DNA polymerase III, beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
rru  Rhodospirillum rubrum ATCC 11170
Pathway
rru03030  DNA replication
rru03430  Mismatch repair
rru03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Rru_A0002
   03430 Mismatch repair
    Rru_A0002
   03440 Homologous recombination
    Rru_A0002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rru03032]
    Rru_A0002
   03400 DNA repair and recombination proteins [BR:rru03400]
    Rru_A0002
Enzymes [BR:rru01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Rru_A0002
DNA replication proteins [BR:rru03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Rru_A0002
DNA repair and recombination proteins [BR:rru03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Rru_A0002
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_3 DNA_pol3_beta_2
Other DBs
NCBI-ProteinID: ABC20807
UniProt: Q2RYI8
Position
1992..3110
AA seq 372 aa
MKLTIERTALLKSLGHVQSVVERRNTIPILSNVRMETGESGFSLNATDMDLEIVETVTAT
TLAPGATTAPAHTLYDIVRKLPDGSQVELSYDGNDGQLVLKAGRSRFSLSCLPVEDFPAL
SAGEFSHSFSLPATDLRGLIDRTRFAISTEETRYYLNGIYLHATESAGVPVLRAVATDGH
RLARAEIPLPAGAAGMPGVIVPRKTVGELRKLIEETGMDITVGLSEQKIRFDFDETRLTS
KLIDGTFPDYERVIPTENDKVLEVDCKLFAQAADRVSAISTEKSRAIKVAVAKGTMTLSA
SSPDAGSAVEEIEAAYQSTSLEIGFNSRYLLDILGQVEGGSVRLTFADAASPTVIRDVAD
ASAVYVLMPMRV
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgaagctgacgatcgagcgcaccgcccttctcaagtccttgggacacgtccagagcgtc
gtcgagcggcgcaatacgattcccatcttgtcgaacgtgcggatggaaaccggcgagagc
ggcttcagcctgaacgccaccgacatggacctggagatcgtcgagacggtgacggcgacc
accctggccccgggagcgaccacggcgccggcccataccctgtatgacatcgtccgcaag
ctgcccgacggcagccaggtggaattgagctatgacggcaacgacggccagctggtgctc
aaggccgggcgctcgcggttttcgctgtcgtgcctgccggtcgaggattttcccgcgctc
agcgccggcgagttcagtcacagcttctcgctgccggcgaccgatctgcgcggtctgatc
gatcgcacgcgctttgccatctccaccgaggaaacccgctactacctcaacggcatctat
ctgcacgccacggaaagcgccggggtgccggtgttgcgcgccgtggccaccgatggccac
cgtttggcccgcgccgagattcccttgcccgccggcgccgccggcatgcccggggtgatc
gtgccgcgcaagaccgtgggcgaattgcgcaagctgatcgaagagaccggcatggatatc
accgtcgggctgtccgagcagaagatccgcttcgatttcgacgaaacccgcctgacctcc
aaactgatcgacggcactttccccgattacgagcgcgtgatcccgaccgaaaacgacaag
gttctggaagtcgattgcaagcttttcgcccaggccgccgaccgggtgtcggcgatctcg
acggaaaagtcccgggccatcaaggttgccgtcgccaagggtacgatgacgctttcggct
tcgagtcccgatgccggcagcgccgtcgaggagatcgaggcggcctatcagtcgacctcg
ctcgagatcggcttcaattcccgctacctgctcgacattctcggtcaggtcgagggggga
tcggtgcgcctgacctttgccgacgccgcctcgccgacggtcattcgcgacgtcgccgac
gcctcggccgtctatgtgctgatgccgatgcgggtgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (60)   
   KEGG ORTHOLOGY (1)   
   RefGene (57)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (73)   

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