KEGG   Rathayibacter rathayi: C1O28_09650
Entry
C1O28_09650       CDS       T05845                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
rry  Rathayibacter rathayi
Pathway
rry00740  Riboflavin metabolism
rry01100  Metabolic pathways
rry01110  Biosynthesis of secondary metabolites
rry01240  Biosynthesis of cofactors
rry02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rry00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    C1O28_09650 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C1O28_09650 (ribD)
Enzymes [BR:rry01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     C1O28_09650 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     C1O28_09650 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AZZ50502
Position
2028454..2029506
AA seq 350 aa
MRRALALAERGPSRGPNPRVGCVILAPDGTALGEGWHRGAGTAHAEVDALSHVAPGAASG
ATAVVSLEPCDHTGRTGPCSGALIEAGVSRVVYAVTDPGKRSAGGGRTLRAAGVEVIEGV
LAEEGEQFLHPWLTATRRHRPFVTLKWASTLDGRTAAVDGSSRWITGAAARQRVHEQRAA
HDAILVGTGTILADDPALTARGDGGELLAHQPVPVVVGTRSVPPDAQLHAHPRAAMFERT
HDLVAVLGRLYSAEIRCVYVEGGPTLASALVAAGLVDEYLVFLAPALLGGPRLALGDLGV
TSIGDARRLSLRSVEVLGDDLLVTARPDALPAGGAGAPARRPHALQMETH
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgcgccgagcgctggcgctcgccgagcgcgggccctcccgcggacccaacccgcgcgtg
ggctgcgtgatcctcgcgcccgacggcaccgcgctgggcgagggctggcatcgtggcgcc
ggtaccgcgcacgccgaggtcgacgcgctctcgcatgtcgcgccgggcgccgcctccgga
gccacggccgtcgtctcgctcgagccctgcgaccacaccgggcgcaccggcccgtgcagc
ggcgccctgatcgaggccggcgtctcgcgcgtcgtctacgccgtcaccgacccgggcaag
cgctcggcgggcggcgggcgcaccctccgcgcggccggcgtcgaggtgatcgagggcgtg
ctcgccgaggagggcgagcaattcctacacccgtggctcaccgcgacccgccgccaccgc
cccttcgtcacgctcaagtgggcctcgacgctcgatggtcgcaccgcggccgtcgatggc
agcagccgctggatcaccggagccgcggcccgccaacgcgtgcacgagcagcgcgccgcg
cacgacgcgatcctggtcggcaccggcaccatcctcgccgacgaccccgcactcaccgcc
cgcggcgacggaggcgaactactcgctcaccagccggtgcccgtcgtcgtcggcacccga
tccgtccctcccgacgcccaactacacgcgcacccccgagccgcgatgttcgagcgcact
cacgacctcgtcgccgtcctcgggcgcctctactccgccgagatccgctgcgtctacgtc
gagggcgggccgaccctcgcctccgccctcgtcgccgccgggctggtcgatgagtacctc
gtcttcctcgcgcccgccctgctcggcgggccccgcctcgcgctcggcgacctcggcgtg
acgagcatcggcgacgctcgacgcctctccctccgctcggtcgaggtcctcggcgacgac
ctgctcgtgaccgcccgccccgacgccctccccgcgggcggtgccggggccccggcccgc
cgcccccacgccctgcagatggagacgcactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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