KEGG   Rathayibacter rathayi: C1O28_13535
Entry
C1O28_13535       CDS       T05845                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
rry  Rathayibacter rathayi
Brite
KEGG Orthology (KO) [BR:rry00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rry03032]
    C1O28_13535
   03400 DNA repair and recombination proteins [BR:rry03400]
    C1O28_13535
Enzymes [BR:rry01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     C1O28_13535
DNA replication proteins [BR:rry03032]
 Prokaryotic type
  DNA Topoisomerases
   C1O28_13535
DNA repair and recombination proteins [BR:rry03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      C1O28_13535
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C
Other DBs
NCBI-ProteinID: AZZ50083
UniProt: A0A2S5XW55
Position
complement(2819521..2822121)
AA seq 866 aa
MADEADTPTGPDESDDIVTDTGVVIHGHDKIEPVDLQLEMQRSYLDYAMSVIVGRALPEV
RDGLKPVHRRVIYAMYDGGYRPDKAFSKCSRVVGDVMGQFHPHGDSAIYDALVRLVQPWS
LRYPLALGQGNFGSPGNDGAAAPRYTETKMAPLALEMVRDIDKNTVDFQDNYDGRTREPA
ILPARFPNLLVNGSVGIAVGMATNIPPHNLREVAAGAKWALENPEATREELLEALLQRIK
GPDFPTGAQILGVRGIQDAYRTGRGSITMRAVVSIEEIQGRTCLVVTELPYQVNPDNLAI
KIAELVKDGRVSGIADIRDETSGRTGQRLVVVLKRDAVAKVVLNNLYKHTPLQENFGANM
LAIVDGIPRTLSLDGFIRAWVDHQVEVIVRRTQYLLDEAEARIHILRGYLKALDALDEVI
ALIRRSPTVEEARDGLMELLDIDEVQSRAILDMQLRRLAALERQKIIDEHDRIQAEIEDY
KSILASPERQRTIISDELGDIVDRFGDDRRTEILFGFDGDMSVEDLIPEEEMVVTVTRGG
YLKRTRSDSYRAQHRGGRGVRGAQLKADDIVEHFFVTTTHHWLLFFTNTGRVYRAKTYEL
QEAGRDAKGQHIANLLALEPGEQIAQILDIRDYEAARYLVLATRDGLVKKTALAEYDTNR
SGGIIAIKLRDGDELVSALLVEEDSDVLLVSRKGMSIRFTASDEALRPMGRSTSGVRGMS
FRGEDRLLDANVVSDEGFVFVVTEGGYAKRTAVDQYRLQGRGGLGIKVAKLEDKRGDLVG
AIITGEDDEVLVVLASGKVVRSAVAEVPAKGRDTMGVVFARFAEDDRIIALAKNTERNLD
AQDEDPDAAAPAESGPASEEDGSVDE
NT seq 2601 nt   +upstreamnt  +downstreamnt
atggcagacgaagcagacacccccaccggaccggacgagagtgacgacatcgtcactgac
accggtgtcgtgatccacgggcacgacaagatcgagccggtggacctgcagctcgagatg
cagcgctcctacctcgactacgcgatgagcgtcatcgtgggccgcgctctgccggaggtg
cgtgacgggctcaagccggtgcaccgccgtgtcatctacgccatgtacgacggtggttac
cgcccggataaggcgttttcgaagtgctcgcgcgtcgtcggcgacgtgatgggacagttc
catccgcacggcgactccgcgatctacgacgcgctggtgcgcctggtgcagccgtggagc
ctgcgctatccactcgcactgggccagggcaacttcggttcccccggcaatgatggcgca
gctgctccgcgctacaccgagaccaagatggcgccgctcgcgctcgagatggtccgcgac
atcgacaagaacaccgtcgacttccaggacaactacgacggccgcacgcgcgagccggcg
attctccccgcgcgcttcccgaatctgctggtcaacggctctgtcggcatcgcagtcggt
atggcgaccaacattccgccgcacaacctgcgcgaggtcgccgccggcgcgaagtgggcg
ctcgagaaccccgaggccacgcgcgaggaactcctcgaggcgctgctgcagcggatcaag
ggccccgacttccccaccggcgcacagatcctcggcgtccgcggtattcaggacgcgtac
cgcaccggtcggggctcgatcacgatgcgggccgtggtctcgatcgaggagatccagggc
cgcacctgtctcgtggtcaccgagttgccgtaccaggtgaatccggacaatctcgcgatt
aagatcgccgagctggtcaaggacgggcgggtctccggcattgcggatatccgcgacgag
acctccggccgcaccggtcagcgcctcgtggtcgtgctcaaacgcgatgccgtggcgaag
gtggtgctgaacaacctctacaagcacacgccgctgcaggagaacttcggcgcgaacatg
ctcgcgattgtcgacggcattccgcgcacgctctcgctcgacggcttcatccgcgcgtgg
gtcgaccaccaggtcgaggtcatcgtgcgccgcacccagtacctcctcgacgaggcggaa
gcgcggattcacattctgcgcggctatctcaaggcgctcgacgcgctcgacgaggtcatc
gcgctgatccgccgttcgcccaccgtggaggaggcgcgcgacggcctgatggagctgctc
gacatcgacgaggtgcagtcccgcgccatcctcgacatgcagctgcgccgactcgcggcc
ctcgagcgtcagaagatcatcgacgagcacgaccggatccaggccgagatcgaggattac
aagtcgatcctcgctagccccgagcgccagcgcacgatcatctcggatgaactcggggac
atcgtggaccgcttcggcgacgaccgccgcaccgagatcctcttcggtttcgacggcgac
atgagcgtcgaggacctgatccccgaggaggagatggttgtcaccgtcacccgcggtggc
tacctcaagcgcacccggagcgactcctatcgggcgcagcaccgtggtggccgcggtgtg
cgtggcgcgcagttgaaggccgacgacatcgtcgagcacttcttcgtcaccaccacacac
cactggctcctcttcttcacgaacaccgggcgggtgtaccgcgccaagacctacgaactg
caggaggcgggccgcgacgccaaggggcagcacatcgcgaacctgctcgcgctcgagccg
ggtgagcagatcgcgcagatcctcgacatccgggactacgaggcggcgcgctatcttgtc
ctcgcgacgcgcgacgggctggtgaagaagacggctctcgccgagtacgacacgaaccgc
tccggcgggatcatcgcgatcaagctgcgcgacggcgacgaactggtttcggcgctcctg
gtcgaggaggacagcgacgtgctgctcgtctcgcgcaagggcatgtccatccgcttcact
gcgtccgatgaggcgctgcgtccgatgggtcgctctacctcgggcgtgcgggggatgtca
ttccgtggggaggaccgactgctcgacgccaacgtcgtcagcgacgaggggttcgtgttc
gtggtcaccgagggcggatacgcgaagcggaccgcggtcgatcagtatcggctccaggga
cgtggcggtctgggcatcaaagtcgccaagctcgaggacaagcggggcgacctggtgggc
gcgatcatcaccggagaggacgacgaggtgctcgtcgttctcgccagtggcaaggtggta
cgctctgccgtggccgaggtaccggccaagggtcgcgacaccatgggagtcgtcttcgca
cgattcgctgaggacgaccgcatcatcgcactcgccaagaacaccgaacgtaatctcgac
gcccaggacgaggatcccgacgccgcggcgccggccgagtccggtccggcgtcggaagag
gatgggtccgtagatgagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system