KEGG   Rhodococcus ruber: CS378_01495
Entry
CS378_01495       CDS       T05142                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
rrz  Rhodococcus ruber
Pathway
rrz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rrz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CS378_01495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rrz03019]
    CS378_01495
   03016 Transfer RNA biogenesis [BR:rrz03016]
    CS378_01495
Enzymes [BR:rrz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     CS378_01495
Messenger RNA biogenesis [BR:rrz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CS378_01495
Transfer RNA biogenesis [BR:rrz03016]
 Prokaryotic type
  tRNA degradation factors
   CS378_01495
SSDB
Motif
Pfam: RNase_PH PNPase S1 KH_1 RNase_PH_C KH_2 KhpA-B_KH DUF5817 PCB_OB
Other DBs
NCBI-ProteinID: ATQ27527
UniProt: A0A098BJ48
Position
322794..325091
AA seq 765 aa
MTSNSAVEVDEGVFESVAVLDNGSFGTRQIRFETGRLAQQAAGSVVAYLDDETMLLSATS
ASKQPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVD
GLRNEIQVVVTVLSLNPNDLYDVVAINAASASTQIAGLPFSGPVGGVRVALITSEENKTG
QWVAFPTVEQLENAVFDMVVAGRIVGGGDNPETADVAIMMVEAEATGNVVELVAGGAQAP
TETVVAEGLEAAKPFIARLCIAQQQLAAAAAKPTGDFPVFPAYEADVYEAVEAAASAKLS
EALTIAGKQERDERTDEVKVEVLEQVAPNFEGREKEIGAAFRSLTKKLVRQRILRDQFRI
DGRGVTDIRALSAEVAVVPRAHGSALFERGETQIMGVTTLDMVKMAQQIDSLGPETSKRY
MHHYNFPPYSTGETGRVGSPKRREIGHGALAERALIPVLPSQEEFPYAIRQVSEALSSNG
STSMGSVCASTLSLLNAGVPLKAPVAGIAMGLVSDEVDGETRYVALTDILGAEDAFGDMD
FKVAGTKDFVTALQLDTKLDGIPSQVLAGALAQARDARATILEVMAEAIETPDEMSPFAP
RITTIKVPVDKIGEVIGPKGKMINSITEETGANISIEDDGTVYVGAADGPSAQAAIDKIN
AIANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGNGKRIAKVEDVVNVGS
KIRVEIADIDNRGKISLVPVPDEDTAGASDATPAVPAESGDTAES
NT seq 2298 nt   +upstreamnt  +downstreamnt
atgaccagcaattccgcagtcgaggtcgacgagggcgtgttcgagtccgtcgcggtcctc
gacaacgggtccttcggcacccgtcagattcgtttcgagaccggccgcctcgcccagcag
gccgccggctccgtcgtcgcgtacctcgacgacgagaccatgctgctgtcggcgacgagc
gcctccaagcagcccaaggagcacttcgacttcttcccgctgacggtggacgtcgaggag
cgcatgtacgccgcgggacgcatccccggctcgttcttccgtcgtgagggccggccctcg
accgacgcgatcctgacctgccgtctcatcgaccggccgctgcgcccgtcgttcgtcgac
ggcctgcgcaacgagatccaggtcgtggtgacggtgctcagcctgaacccgaacgacctg
tacgacgtcgtcgccatcaacgccgcgtcggcatccacgcagatcgccggcctgccgttc
tccggacccgtcggtggcgtgcgggtcgcgctgatcacctcggaggagaacaagaccggc
cagtgggtcgcgttccccacggtcgagcagctcgagaacgccgtgttcgacatggtcgtc
gcgggccgcatcgtgggtggcggcgacaaccccgagaccgccgacgtcgcgatcatgatg
gtcgaggccgaggccaccgggaacgtcgtcgagctggtggccggcggggcgcaggcaccg
accgagaccgtcgtcgccgagggcctcgaggccgccaagccgttcatcgcgcggctgtgc
atcgcccagcagcagctcgccgccgccgcggcgaagcccaccggtgacttcccggtgttc
ccggcctacgaggcagacgtgtacgaggccgtcgaggccgccgcgtcggccaagctgtcc
gaggcgctgaccatcgccggcaagcaggagcgcgacgagcggaccgacgaggtcaaggtc
gaggtcctcgagcaggtggcccccaacttcgagggccgcgagaaggagatcggcgcggcg
ttccgttccctgacgaagaagctggtccgccagcggatcctgcgggaccagttccgcatc
gacggccgcggtgtcacggatatccgtgccctgtccgccgaggtcgcggtggtgccgcgc
gcgcacggctcggcgctgttcgaacgcggcgagacccagatcatgggtgtcaccacgctg
gacatggtgaagatggcgcagcagatcgactcgctcggtcccgagaccagcaagcggtac
atgcaccactacaacttcccgccgtactccaccggtgagaccggccgcgtcggctccccg
aagcgccgcgagatcggccacggcgccctcgccgagcgggccctgatcccggtcctgccc
agccaggaggagttcccctacgcgatccgtcaggtctccgaggcgctcagctcgaacgga
tccacctcgatgggctcggtgtgtgcctccacgctctcgctgctgaacgccggcgtgccc
ctcaaggcgcccgtcgccggtatcgcgatgggcctggtctccgacgaggtcgacggtgag
acccgttacgtcgcactgaccgacatcctcggcgccgaggacgcgttcggtgacatggac
ttcaaggtggccggcacgaaggacttcgtcaccgcgctgcagctcgacaccaagctcgac
gggatcccgtcccaggtgctcgccggcgcgctggcgcaggctcgcgacgcccgcgccacc
atcctcgaggtgatggccgaggccatcgagaccccggacgagatgagcccgttcgctccg
cggatcaccaccatcaaggtcccggtggacaagatcggcgaggtcatcggccccaagggc
aagatgatcaactcgatcaccgaggagaccggcgcgaacatctccatcgaggacgacggc
acggtgtacgtcggcgccgccgacggcccgtccgcccaggccgcgatcgacaagatcaac
gccatcgcgaacccgcagctgccgaaggtgggcgagcggttcctggggaccgtggtcaag
accacggcgttcggtgcgttcgtctcgctgctgccgggccgcgacggcttggtgcacatc
agcaagctcggcaacggcaagcgcatcgccaaggtcgaggacgtcgtcaacgtcggctcg
aagatccgcgtcgagatcgccgacatcgacaaccggggcaagatcagcctggtgccggtg
cccgacgaggacaccgccggcgcttcggacgcgacacccgcagttccggccgagtccggc
gacaccgccgagagctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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