KEGG   Rhodoferax saidenbachensis: RS694_16375
Entry
RS694_16375       CDS       T04623                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rsb  Rhodoferax saidenbachensis
Pathway
rsb00300  Lysine biosynthesis
rsb00470  D-Amino acid metabolism
rsb01100  Metabolic pathways
rsb01110  Biosynthesis of secondary metabolites
rsb01120  Microbial metabolism in diverse environments
rsb01230  Biosynthesis of amino acids
Module
rsb_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rsb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RS694_16375
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RS694_16375
Enzymes [BR:rsb01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     RS694_16375
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N TRA-1_regulated
Other DBs
NCBI-ProteinID: APW43953
UniProt: A0A1P8KD39
Position
3426602..3427885
AA seq 427 aa
MTLPSLPGHPHIHYQNGLLQVEDQNLDALATEYGTPLFVYSKASMLAALAAYQRGFAGRN
AQICYAMKANSSLAVLQVFARAGCGFDIVSGGELERVLAAGADVSKVIFSGVGKTRTEMQ
RALEAGIGCFNVESEAEIEVLNTVAVALNLRAPISIRVNPNVDPKTHPYISTGLKGNKFG
IAHERTLATYQRAAALPGLHVVGIDCHIGSQITLEAPYLDAMDRMLDLVESIEAAGIPIE
HIDFGGGLGINYAGDTPPAADALWAKLLAKLDARGFGQRKLMIEPGRSLVGNAGVCVTEV
LYMKPGEQKNFCIVDAAMNDLPRPAMYQAFHNIVPLNESQQAGSSADVFDVVGPVCESGD
WIGHDRALAVQAGDRLAVLSAGAYCMSMSSNYNSRPRAAEVLVDGPQAHLIRARDTLADQ
LRGEKLL
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgactctccccagcctgccgggccatccccatatccactaccagaacggtctgctccaa
gtggaagaccagaacctggatgctttggcaaccgaatacggcacaccgctgttcgtttac
tccaaagcctccatgctggcggccctggcggcctaccagcgtggctttgccgggcgcaac
gcgcagatttgttacgccatgaaggccaactcgtccctggccgtgctgcaggtctttgcc
cgcgcaggttgtggctttgacatcgtgtccggcggagagctggagcgggtgttggctgca
ggcgcggatgtttccaaagtcattttttccggcgtgggcaagacccgtaccgagatgcag
cgcgccctcgaagctggcattggctgcttcaacgtggagagcgaagcagaaattgaggtg
ctgaacaccgtggctgtggcgctgaacctgcgcgcgcccatcagcatccgcgtcaatccc
aatgtggaccccaagacccacccctacatctccaccgggctgaagggcaacaagttcggc
atcgcccacgaacgcacgctggccacctaccagcgcgctgccgccctgccgggcctgcat
gtagtcggtattgactgccatatcggctcacaaatcacgctggaagcgccctacctggat
gccatggaccgcatgctggacctggtcgaatccatcgaggctgcaggcatcccgattgag
cacatcgattttggtggcggcctgggcatcaactatgccggtgacaccccgcccgccgcg
gatgccctgtgggccaagctgctggccaagctggacgcgcgcggctttggccaacgcaag
ctgatgatcgagcccggccgctctctggtcggcaatgccggcgtctgtgtgaccgaggtg
ctctacatgaagcccggcgaacagaaaaacttctgcatcgtggacgcggccatgaacgat
ctgccccgcccggccatgtaccaggccttccacaacattgttccgctgaacgaaagccag
caggccggtagcagtgcagacgtctttgacgtggtgggcccggtctgtgaaagcggcgac
tggatcggccacgaccgtgcgctggccgtgcaggcgggcgaccgcctggcggtgctgtct
gcgggcgcctattgcatgagcatgtccagcaactacaactcgcgcccgcgtgcggccgaa
gtactggtcgatggcccccaggcccacctgatccgcgcccgggacacattggcagaccag
ctgcgtggcgagaaattgctataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system