KEGG   Ralstonia solanacearum CFBP2957: RCFBP_20319
Entry
RCFBP_20319       CDS       T01272                                 
Symbol
recJ
Name
(GenBank) Single-stranded DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rsc  Ralstonia solanacearum CFBP2957
Pathway
rsc03410  Base excision repair
rsc03430  Mismatch repair
rsc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rsc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RCFBP_20319 (recJ)
   03430 Mismatch repair
    RCFBP_20319 (recJ)
   03440 Homologous recombination
    RCFBP_20319 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsc03400]
    RCFBP_20319 (recJ)
DNA repair and recombination proteins [BR:rsc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     RCFBP_20319 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     RCFBP_20319 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      RCFBP_20319 (recJ)
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB Glyco_transf_4
Other DBs
NCBI-ProteinID: CBJ43511
Position
2305798..2307495
AA seq 565 aa
MTRIAIRPHSAETASLLAGHGIHPVLARILAARGVARPSELSTELTDLLPPAQLKGIDDA
ARYLADAIAAGKRLLIVADYDCDGATACAVGVRGLRMLGAQVGYIVPNRFEYGYGLSPEI
VALAAREQPDVLVTVDNGIADVAGVAAANALGIDVVVTDHHMPGAQLPEARVIVNPNQPG
CGFPSKHLAGVGVMFYVLLALRAELRSRGTFTQQNQPRLDALLDLVALGTVADVVRLDAN
NRLLVAQGLKRMRAGRMCAGIAALFRVSGREARRASTFDLGFGLGPRLNAAGRLADMSLG
IECLLTDDFDRAMAIAAELDGMNRERREIEAGMQQEAMAILSSALASMDGAGRHTVAVYN
ETWHQGVIGIVASRLKDKFHRPVITFAPGDDGVIKGSGRSIPGFHLRDALDAVHKRCPGL
IVKFGGHAMAAGLSLRADGFDRFVETFEAVGREWLNEALLSRVLETDGEAEPECFTPQFV
ELLETHVWGQGFPAPSFCGEFDVLSQAVLKDKHLKLQLGRGKQRFEAIWFNHAEPLGASA
YVAYRLDNNTFNGITRVQMVIEHAQ
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgacccgcatcgccatccgtccgcattccgccgaaaccgccagcctgctggccggccac
ggcatccatcccgtcctggcccgcatcctggccgcgcgcggcgtcgcccgccccagcgag
ctgtcgaccgagctgaccgacctgctgccgcccgcgcagctcaagggcatcgacgacgca
gcgcgctacctggccgacgccatcgccgccggcaagcgcctgctgatcgtcgccgactac
gactgcgacggcgccaccgcctgcgcggtcggcgtgcgcgggctgcgtatgctgggcgcg
caggtcggttacatcgtgcccaaccgcttcgaatacggctacggcctgtcgcccgagatc
gtagccctggccgcgcgcgagcagcccgatgtgctcgtcaccgtcgacaacggcatcgcc
gacgtcgcgggcgtggcggcggccaacgcgctgggcatcgacgtcgtcgtcaccgatcac
cacatgccgggcgcgcaactgcccgaggcgcgcgtgatcgtcaacccgaaccagccgggc
tgcggcttcccgagcaagcacctggcgggcgtgggcgtgatgttctacgtcttgctggca
ctgcgggccgagctgcgcagccgcggcaccttcacgcaacagaaccagccgcgcctcgat
gcactgctcgatctggtggcgctcggcaccgtggccgacgtggtccggctcgatgccaac
aaccggctgctggtggcgcagggcctcaagcgcatgcgcgcgggccggatgtgcgccggc
atcgcggcgctgttccgcgtgtccgggcgcgaggcgcggcgcgcctccaccttcgacctc
ggctttggcctgggcccgcgcctgaacgccgccggccgcctggccgacatgtcgctcggc
atcgaatgcctgctgaccgacgatttcgaccgcgccatggccatcgccgccgaactcgac
ggcatgaaccgcgagcgccgcgagatcgaagccggcatgcagcaggaggccatggcgatc
ctgtcgtccgcgctggccagcatggacggcgccggccgccacaccgtcgcggtctacaac
gagacgtggcaccagggcgtgatcggcatcgtcgcctcgcgcctcaaggacaagttccac
cggccggtgatcaccttcgcgccgggcgacgacggcgtcatcaagggctcgggccgctcc
atccccggcttccacctgcgcgacgcgctggacgccgtgcacaagcgctgccccgggctg
atcgtcaagttcggcggccacgcgatggcggccgggctgtcgctgcgcgcggacggcttc
gaccggttcgtcgagaccttcgaagcggtcggccgcgaatggctgaacgaggccctgctc
tcgcgcgtgctcgaaaccgacggcgaagccgagccggagtgcttcacgccgcagttcgtg
gagctgctcgaaacccacgtctggggccagggcttcccggcgccgagcttctgcggcgag
ttcgacgtgctgtcgcaggccgtgctgaaggacaagcacctgaagctgcagctcgggcgc
ggcaagcagcgcttcgaggcgatctggttcaaccacgcggagccgctcggcgcctcggcg
tacgtggcctaccggctggacaacaacaccttcaacggcatcacccgcgtacagatggtg
atcgaacatgcgcagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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