KEGG   Candidatus Endomicrobium trichonymphae Rs-D17: TGRD_056
Entry
TGRD_056          CDS       T00755                                 
Name
(GenBank) Csn1-like CRISPR-associated protein
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
rsd  Candidatus Endomicrobium trichonymphae Rs-D17
Brite
KEGG Orthology (KO) [BR:rsd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rsd02048]
    TGRD_056
Prokaryotic defense system [BR:rsd02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    TGRD_056
SSDB
Motif
Pfam: RuvC_III HNH_4 HNH zf-Di19
Other DBs
NCBI-ProteinID: BAG13539
UniProt: B1GZ57
Position
102302..105400
AA seq 1032 aa
MLYHIANHRGTDSVRSFLEYDDDKIKENTLTAKIAKETKKVIDAKKYRTFGEYLYKGKIE
KFQQNIRKKVSNRKTPANKNKEFAVTRDVIIKETEKILASQKQYYTYILTDEYIKKIKDA
ISYQTEKLIPESGYCPYFKDEKRLPRSHKLNEYRRMYEALNNAKYFDPVLDENTGEILSY
QEKEFSREEKKILFDEVLLKGMELTESGAKKLLYHLPDGCEVQLQGRDKTTQKIKGYALV
DLEASPFWLRLSQQQQDEFLYDWNSLPLEKLKPKLTNYYSLTESEVDETFQEIKLPSNYA
SVGKKAMEILLTYIKDGCSYTEALEKAVSEGKLKVDKQTMIYDSLPYYGKILKESTQKLI
GKAFSKQFADRNYKEPDTNKNEREFGKIANPVVHQTLNELRKLINEIITVFGKKPLEIGL
ETTRELKKSKKNREYLSKQQNKNEYARNRIYKEYIEPHLSQIKSRQENPSKYISKFELLE
EQNFICPFCSEKITPDDIINSKVDVEHIFPIEESEDITKNNLVIAHNECNADKGKKSPFD
AFGDKTSGKYRWNCILHNAQKNLPHKVWRFYQGSLEKFLENKPMSRRFGTDNSYISKIAA
RYLACLFNDPYHSEIFCIKSSLIAQLRIAWDLNSIMVPLVKNILSEKELEEFKISKNKKI
RIDNRHHALDAIVIAYANRGYHNFLNRIHAKEYKINYREKSWLSKILLPPLNRDLEDFKI
SVKDSIEKANVSIKHDHNTNGSLVKATAYKVYYSGAGEYIITTSKNVEEISFKEKEDPKD
TLYRALCKFECRDIDIKDEKLIKKLKYNSTLYKKVQNNLSKAKQELEQDNKKTEEEGKKS
QKITEVRIYKKACSLVKGQYIQCGSRLKDKFFAVKEPTEIKTGLGYDTGDNLFLDLYYDK
TGKLCGEIIRKVNFNRNKPNYQKEGYTLFERIYQSDILEVDTSEDRISLKNKTGSAPSDR
TFIKVNTFTEVNAYFDGKRDKIQIFFGNLLKSSFKNDSFFISSMQKYNVRKVILTSLGII
KYRSQILKNKEV
NT seq 3099 nt   +upstreamnt  +downstreamnt
gtgttatatcacattgcaaaccatagaggtacggactcagttagaagtttcttagagtat
gatgacgataagataaaagagaacacgttaacagcaaaaattgcaaaagaaactaagaaa
gttatagatgcaaaaaaatatcgtacattcggcgaatatctttataagggaaaaatagaa
aaatttcagcaaaatataagaaaaaaagtcagtaatagaaagacaccagcaaataaaaat
aaagagtttgctgttaccagagatgtaataattaaagaaactgaaaaaattttagccagt
caaaaacaatattatacttatattttgactgatgagtatattaaaaaaattaaagatgca
atatcttaccaaactgaaaaacttatcccggaatctggatattgtccttattttaaagat
gaaaaaagactccctcgctcacataagcttaacgaatacagaagaatgtacgaggctctt
aataacgcaaaatattttgatccggttctcgatgagaatactggtgaaattttaagttat
caagaaaaagaattttcaagagaagaaaaaaagatattatttgacgaagtgttattaaaa
ggtatggaattaactgaatcaggagcaaagaaattattatatcatctccctgacggttgt
gaggtacagcttcaaggtagagataaaacaactcaaaagattaaaggttatgctctggtt
gatcttgaagcatcgccgttttggttaagactttcacagcaacagcaggatgaatttctt
tatgactggaacagtcttccgcttgaaaaattaaagcctaaattaacaaactattattcc
ttaactgaaagtgaagttgatgaaacttttcaggaaatcaaacttccgtcaaactacgct
tctgttggaaagaaagcaatggaaattctgctgacatatattaaggacggttgttcttat
actgaagctctagagaaagcagtcagtgaaggcaaacttaaagttgacaaacagacgatg
atatatgattcgttgccgtactatggtaagattcttaaggaaagcactcaaaaacttata
ggaaaagctttctcaaaacaatttgctgacagaaattataaagaacctgatactaataaa
aatgaaagagagtttggcaaaattgccaacccggtagttcatcagacattaaatgaactc
agaaaacttatcaatgaaattattactgtgtttggtaaaaaacctctagaaataggtttg
gagacaacaagagaacttaaaaaaagcaagaaaaatagagaatatttatccaagcaacaa
aataaaaacgaatatgctagaaataggatatacaaagaatatatagaaccgcatttgtcg
cagataaagagccggcaggaaaatccttcaaaatatatttcgaaatttgaacttcttgaa
gaacaaaattttatttgtccgttttgctctgaaaagataactcctgatgatataataaat
tcaaaagttgacgtagaacatattttcccgattgaagagagcgaagacattacaaaaaac
aatcttgtaattgcacataatgaatgtaatgctgacaaaggaaagaaatcgccttttgat
gcttttggggataagacatccgggaaatacaggtggaattgcattttacacaatgcccaa
aaaaatttgccgcacaaagtatggcggttttatcaaggttctcttgaaaagtttttagaa
aacaaacctatgtcaaggcgttttgggacagacaacagttatatttctaaaatagccgcg
agatatctagcgtgtctttttaatgatccttatcattcagaaatattttgtattaaatct
tctcttatcgctcagcttagaattgcttgggatctgaatagtataatggttcctcttgta
aaaaacatcctttcagaaaaagaattagaagagttcaaaatatcgaaaaacaaaaaaata
agaattgataacagacatcatgctttagatgctatagtaatagcctacgcaaatagaggg
tatcataattttttaaacaggatacatgcaaaagaatataaaataaattatagagaaaaa
agctggttatctaaaatattattaccgccattaaatagagatttagaagactttaaaata
agcgtaaaagattctatagaaaaggcgaatgtcagtatcaagcatgaccataatactaac
ggatcattagtaaaagctacagcttataaagtttattattccggagccggggaatatata
attacaacctcaaaaaatgttgaagaaatatcttttaaagaaaaagaggatcctaaagat
actctttatcgggctttatgtaaatttgaatgtagagacatagacatcaaagatgaaaaa
ttaataaaaaaactcaaatataatagcactctttataaaaaagtacaaaataatttgtct
aaagcaaaacaagaattggaacaagataacaaaaaaaccgaagaagaagggaaaaaatcg
caaaaaataacagaagttcggatttataaaaaggcctgcagcttagtcaagggacagtac
attcaatgcggcagcagacttaaggataaattttttgctgtaaaagaacctacggaaata
aaaacggggcttggctatgataccggcgataatttatttttagatttatattatgataag
acaggaaaactttgcggtgagattatacgaaaagtaaattttaatcgaaataaaccaaac
tatcaaaaagaaggctatactctttttgaaaggatttatcagagcgatattcttgaggtt
gatacttctgaagatagaatctcattgaaaaataaaacaggttctgctccgagtgacaga
acgtttataaaagttaacactttcacagaagtaaatgcgtattttgacggtaaaagagat
aaaatacaaatattttttggaaatttattgaaatcaagttttaaaaatgactcatttttt
atatcaagtatgcagaaatacaatgtaagaaaagttattttaacttctttaggcattata
aaataccgctcgcaaatattaaaaaacaaagaggtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (60)   

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