KEGG   Ralstonia pseudosolanacearum FQY_4: F504_1218
Entry
F504_1218         CDS       T02751                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
rse  Ralstonia pseudosolanacearum FQY_4
Pathway
rse03030  DNA replication
rse03430  Mismatch repair
rse03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    F504_1218
   03430 Mismatch repair
    F504_1218
   03440 Homologous recombination
    F504_1218
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rse03032]
    F504_1218
   03400 DNA repair and recombination proteins [BR:rse03400]
    F504_1218
Enzymes [BR:rse01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     F504_1218
DNA replication proteins [BR:rse03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     F504_1218
DNA repair and recombination proteins [BR:rse03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     F504_1218
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA DNA_pol3_tau_5 RuvB_N DUF3646 AAA_16 AAA_22 AAA_18 AAA_30 AAA_14 Herpes_Helicase nSTAND3 AAA_19 AAA_2 TsaE PIF1 T2SSE AAA_assoc_2 Mg_chelatase AAA_28 AAA_24
Other DBs
NCBI-ProteinID: AGH83734
Position
1260557..1262731
AA seq 724 aa
MLARKWRPRDFTTLVGQEHVVKALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAKSLNC
IGTDGQGGITAQPCGVCRACTEIDAGRFVDYIEMDAASNRGVDEMAQLLDRAVYAPTAGR
FKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMP
PGHIVSHLDRILGEEGIAHEPNALRLLASAAQGSMRDALSLTDQAIAYSAGEVTEAAVRG
MLGAIDQSYLVRLLDALADENGATLIGIADEMAGRSLSFSGALQDLASLLQKIALAQVVP
AAVQDDWPEADDIRRLAERFDAQSVQLFYQFANLGRNELALAPDEYAGFTMTLLRMLAFQ
PGQSGGDAPPPSGSGKRAVPSAGVQGGSSRPVVAAAAAGPVAQAVPAVRAERVVDAPRAT
YQADPPAAAAPAAAPAPATPAPASAPARRSPALEALAAARQASSRGARGGAAAPASAPAP
VPAPAARPAAAGPRSNPAAAPASPPVRREPAAASAPADDFAPPPWEEMPDEFASPSPDQI
DAAFAGWEAASTTRPGAQAAAARPAQSEPPAAAPVPARAAAPEPVVAATPPDLSASGLTA
FDGDWPTLAARLPLRGLAQQLAHQSELVAVEGATVRLRVPLPALTEASVLERLEAALTEH
FGTPVRVVCDIGAVRATAAAVDAEQRAQRQRDAEDAIAADPFVQALVRDFAATVVPGSIQ
PHAH
NT seq 2175 nt   +upstreamnt  +downstreamnt
gtgctcgcccgcaagtggcgcccccgcgatttcaccacgctggtcggtcaggaacacgtg
gtgaaggcgctcacgcatgcgctcgaacagcagcgcctgcaccacgcatacctgttcacg
ggcacgcgtggtgtcggcaagacgacgctgtcgcgcattctcgccaaatcgctcaattgc
atcggcacggacgggcagggcggcatcaccgcgcagccgtgcggcgtgtgccgcgcctgc
accgagatcgatgccgggcgcttcgtcgattacatcgagatggacgccgcctccaaccgc
ggcgtcgacgagatggcgcagctgctcgatcgcgcggtctacgcacccacggccggccgc
ttcaaggtctacatgatcgacgaagtgcacatgctgaccaaccacgccttcaacgcgatg
ctgaagacgctggaggagccgcccgagcacgtcaagttcatcctcgcgaccaccgacccg
cagaagattcccgtcacggtgctgtcgcgctgcctgcagttcaacctgaagcagatgccg
ccgggacacatcgtgtcccacctggaccgcatcctcggcgaggagggcatcgcgcacgag
cccaatgcgctgcgcctgctggcctcggccgcgcaggggtcgatgcgcgatgcgctgtcg
ctgaccgatcaggccatcgcgtacagcgccggcgaagtcaccgaggcggccgtgcgcggc
atgctgggcgcgatcgaccagagctacctggtgcgcctgctcgatgcgctcgccgacgag
aacggcgcgacactgatcgggatcgccgacgagatggccgggcgcagcctgagcttctcg
ggggcgctgcaggatctggcttcgttgctgcagaagatcgcgctggcacaggtcgtgccc
gccgccgtgcaggacgactggcccgaggccgacgacatccgccgcctggccgagcgcttc
gatgcgcagtcggtgcaactgttctaccagttcgccaacctcggtcgcaacgaactggcg
ctggcgcccgacgaatacgccggcttcacgatgacgctgctgcgcatgctggcgttccag
cccggccagtcgggcggcgatgcgccgccgccgtcgggtagcggcaagcgtgccgtgccg
tcggccggcgtgcagggtggatcgtcgcggccggttgtggcggctgctgccgccgggccg
gtcgcccaggcggtgcctgctgtgcgtgcggaacgggtggtcgatgcaccgcgcgcgacg
tatcaagccgatccgccggccgccgccgcaccggctgcagcgcctgccccagcaaccccg
gccccggccagtgcgccggcccgccgttcaccggcgctggaagcgctggccgcggcgcgc
caggcgtcgagccggggggcgcgcggcggtgccgcggcgccggcttccgcgcctgccccc
gtgccggcgccggccgcacgcccggccgcggccggtccgcgctcgaatccggcggctgcg
cctgcgtcgccgccggtgcgccgtgaaccggctgccgcgtccgcgcctgccgacgatttt
gccccgccgccctgggaggagatgcccgacgagttcgcttcgccgtctcccgatcagatc
gacgccgcgtttgccggctgggaggcggcttcgaccacgcgcccgggcgcgcaggctgcg
gccgcgcgccctgcgcagagtgagccgcccgccgcggcgccggtgccggccagggctgcc
gcaccggagccggtggtcgccgccacgccgcccgacctgagcgccagcggtctgacggcc
ttcgacggcgactggcccacgctcgcggcacgtctgccgctgcgcggcttggcgcagcag
ttggcgcaccagagcgagttggtcgccgtggagggcgcgacggtacgcttgcgtgtcccg
ctgccggcactgaccgaggcaagcgtgctcgaacggctggaggcggcgctgacggagcac
ttcggcacgccggtccgcgtggtttgcgacatcggtgccgtccgggccacggccgccgcc
gtcgatgccgagcagcgtgcccagcgccagcgcgacgccgaggacgccatcgccgccgat
ccgttcgtgcaggcgctggtgcgggactttgccgcgaccgtcgtgcccggctcgatccag
ccgcacgcgcactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (22)   
   Pfam (22)   
All databases (34)   

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