KEGG   Cereibacter sphaeroides ATCC 17029: Rsph17029_2059
Entry
Rsph17029_2059    CDS       T00484                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rsh  Cereibacter sphaeroides ATCC 17029
Pathway
rsh03410  Base excision repair
rsh03430  Mismatch repair
rsh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rsh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Rsph17029_2059
   03430 Mismatch repair
    Rsph17029_2059
   03440 Homologous recombination
    Rsph17029_2059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsh03400]
    Rsph17029_2059
DNA repair and recombination proteins [BR:rsh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Rsph17029_2059
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Rsph17029_2059
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Rsph17029_2059
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB Prok-RING_1
Other DBs
NCBI-ProteinID: ABN77162
UniProt: A3PLE6
Position
1:2182390..2184141
AA seq 583 aa
MTGPAARAFLGVEASATGRRWVGPSPEEDRLAEAMAQTTRLPLALCRTLVRRGVPASDAE
SFLAPALRDLLPDPLTLKDMAPAAARLLQAVARRERIAIFADYDVDGGSSAALLIVWLRA
LGRSATLYIPDRIDEGYGPNVPAMQALAEAHDLILCVDCGTLSHEPIAAAKGADVVVLDH
HLGAETLPPALAVVNPNRQDEDGALGHLCAASVVFLLLVEANRRLRAEGVQGPDLMAMLD
LVALATVADVAPLTGVNRALVRQGLKVMARRERPGLVALADVARMKTAPNSYALGFLLGP
RVNAGGRIGQADLGARLLSTEDPREAQALAERLDQLNTERREIEARVREEALAQAEARGI
SGPLVWAAAEGWHPGVVGIVAARLKEATNRPAVVIGFENGIGKGSGRSIAGVDLGASIHR
VAHEGLLLKGGGHRMAAGLTVEEGRLEAAMERLGELLARQGAAEAGPADLRLDGLLMPSA
ATAEFVEQIDSAGPYGAGAAAPRFALADQRVTCRRMGDKHMRLTIGGAEGRLEAVAFGCF
DGPLGPLLEGGGAGRFHLAGRLEIDTWGGSARVQMRLEDAARA
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgacgggcccggcggcgcgcgccttcctgggggtcgaggcctccgcgaccgggcgccgc
tgggttggcccctcccccgaggaggaccggctggccgaggcgatggcgcagaccacgcgc
ctgccgctcgcgctctgccgcacgctggtgcggcggggcgtcccggcctccgatgccgag
agcttcctcgcgcccgcgctgcgcgacctcctgcccgacccgctgacgctgaaggacatg
gcgcccgccgccgcgcggctgctgcaggccgtggcccggcgcgagcggatcgcgatcttc
gccgactacgacgtggacggcggctcctccgccgcgctgctgatcgtctggctccgggcg
ctcgggcgctcggccacgctctacatccccgaccggatcgacgagggctacggcccgaac
gtgcccgccatgcaggcgctggccgaggcgcatgacctgatcctctgcgtcgattgcggc
accctctcgcacgagcccatcgcggcggcgaagggcgcggatgtggtggtgctcgatcac
cacctcggcgccgagacgctgccgcccgcgctcgccgtggtgaaccccaaccggcaggac
gaggacggggcgctgggccatctctgtgcggcctccgtcgtgttcctgcttctcgtcgag
gccaaccgccgcctgcgcgcggaaggggtgcagggcccggacctgatggcgatgctcgac
ctcgtggcgctggcgaccgtggccgatgtcgcgccgttgacaggtgtcaaccgcgcgctc
gtgcggcagggcctcaaggtcatggcgcggcgcgagcggccgggcctcgtggcgctggcc
gatgtggcacggatgaagaccgcgcccaacagctatgcgctgggcttccttctcggcccg
cgcgtcaatgcgggcgggcggatcgggcaggcggacctcggcgcacggctgctgtccacc
gaggatccgcgcgaggcgcaggccttggcggagcggctcgaccagctcaacaccgagcgg
cgcgagatcgaggcccgcgtccgcgaggaggctctggctcaggccgaggcgcgcggcatc
tcgggcccgctcgtctgggccgcggccgagggctggcaccccggcgtggtgggcatcgtg
gccgcccggctgaaggaggccaccaaccgccccgccgtggtgatcggcttcgagaacggc
atcggcaagggctcgggccgctcgatcgccggtgtggatctgggcgcttccatccaccgc
gtggcgcatgaggggctgcttctgaagggcggcgggcaccggatggctgcgggcctcacc
gtcgaggaaggccgcctcgaggccgcgatggagcggctgggcgagcttctggcgcggcag
ggggcggccgaggcgggtccggcggacctgcggctcgacgggctcctgatgccctcggcg
gcgacggcggagttcgtcgagcagatcgactccgcgggaccctacggggcgggcgccgcc
gcgccgcgcttcgccctggcagatcagcgcgtgacctgccggcgcatgggcgacaagcac
atgcggctgacgatcggcggcgccgagggccggctcgaggcggtggccttcggctgcttc
gacggcccgctcggcccgcttctggaaggcggcggcgcaggccgcttccacctcgccggc
cggctcgagatcgacacctggggcggcagcgcgcgcgtgcagatgcgcctcgaagacgcg
gcgcgcgcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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