KEGG T00484: Rsph17029

Cereibacter sphaeroides ATCC 17029: Rsph17029_2863

Entry

Rsph17029_2863    CDS       T00484

Name

(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

rsh Cereibacter sphaeroides ATCC 17029

Brite

KEGG Orthology (KO) [BR:rsh00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rsh03009]
    Rsph17029_2863
Enzymes [BR:rsh01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Rsph17029_2863
Ribosome biogenesis [BR:rsh03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Rsph17029_2863

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Met_10 Methyltransf_25 Cons_hypoth95 TRAM

Other DBs

NCBI-ProteinID:

ABN77965

UniProt:

A3PNP9

Position

1:complement(3018678..3019892)

AA seq 404 aa
MIVTIERLGHLGDGIGQGVFVSGALPGETVEGEVVQDRMAAPRIVTPSPDRVRPPCPHAR
SCGGCLLQHASDGFVADWKQEVVRSALAGQGIEAPFRPIAVSPPASRRRATLSARRTKGG
ALVGFHARQSGTIVAIPECKLLHPDLMAAMPALEALVKTGGSRSGELSLTVTRSLGGPDV
AVTGGKPLDAGLRAALAQVAEAQALARLTWEGETIALRVPPAQPFGPARVVPPPSAFLQA
TAEGEAALLAAVRDAIGDARTVTDLFAGAGTFTLPLAAGAEVHAVEGDAAMMAALDRGWR
QAPGLKRVTVETRDLFRRPLEPDELRRTEAVVIDPPRAGAEAQARALARAAVPVVAFVSC
NPVTFARDALILMRGGYRLDWVQVVDQFRWSSHVELAARFSRPA

NT seq 1215 nt +upstreamnt +downstreamnt
gtgatcgtcaccatcgagaggctgggccatctgggcgacggcatcgggcagggcgtcttc
gtgtccggcgcgctgccgggcgagacggtcgagggcgaggtggtgcaggaccgcatggcc
gcgccgcgcatcgtgacgccctcgcccgaccgcgtgcgcccgccctgtccccatgcccgc
agctgcggcggctgtctgctgcagcatgcctcggacggattcgtggccgactggaagcag
gaggtcgtccgctcggctcttgccgggcaggggatcgaggcgccgttccgccccatcgcc
gtctcgccgcccgcctcgcgccggcgcgcgaccctctcggcgcggcgcaccaagggcggt
gcgctcgtgggcttccacgcccgccagtcgggcacgatcgtcgcgatccccgagtgcaag
ctgctgcatcccgacctgatggcggccatgcccgcgctcgaggcgctggtgaagaccggc
ggctcgcgctcgggcgagctgtcgctcaccgtgacgcgcagcctcggcgggcccgacgtg
gcggtgacgggcggcaagccgctcgacgcgggcctgcgggcggccctcgcgcaggtggcc
gaggcgcaggctctcgcgcggctgacgtgggagggcgagaccattgccctccgcgtgccc
ccggcacagcccttcgggcccgcgcgtgttgtgccgccgccgagcgccttcctccaggcg
acggccgagggcgaggcggcgctgctggccgccgtgcgcgatgccattggcgatgcgcga
acggtgacggatcttttcgcgggtgcgggcaccttcaccctgccgctcgcggccggggcc
gaggtccatgccgtcgagggcgatgcggcgatgatggcggcgctcgatcgcgggtggcgg
caggcgccggggctgaagcgggtgacggtggagacgcgcgacctgttccgccgcccgctc
gagcccgacgagctgcgcaggaccgaggccgtggtgatcgatccgccacgcgccggggcc
gaggctcaggcccgggcgctcgcccgcgccgcggtgccggtcgtggccttcgtctcctgc
aaccccgtgaccttcgcccgcgacgcgctgatcctgatgcgcggcggctaccggctcgac
tgggtgcaggtcgtcgaccagttccgctggtcgtcgcatgtcgagcttgccgcgcgcttc
agccgccccgcctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

Download RDF

DBGET integrated database retrieval system