KEGG   Cereibacter sphaeroides ATCC 17029: Rsph17029_3274
Entry
Rsph17029_3274    CDS       T00484                                 
Name
(GenBank) integration host factor, beta subunit
  KO
K05788  integration host factor subunit beta
Organism
rsh  Cereibacter sphaeroides ATCC 17029
Brite
KEGG Orthology (KO) [BR:rsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rsh03032]
    Rsph17029_3274
   03036 Chromosome and associated proteins [BR:rsh03036]
    Rsph17029_3274
   03400 DNA repair and recombination proteins [BR:rsh03400]
    Rsph17029_3274
DNA replication proteins [BR:rsh03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Rsph17029_3274
Chromosome and associated proteins [BR:rsh03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    Rsph17029_3274
DNA repair and recombination proteins [BR:rsh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      Rsph17029_3274
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 LigT_PEase HU-CCDC81_euk_2 HU-DNA_bdg HU-CCDC81_bac_2 Tim44 HU-CCDC81_bac_1
Other DBs
NCBI-ProteinID: ABN78370
UniProt: A3PPV4
Position
2:complement(335795..336076)
AA seq 93 aa
MIRSELIQKIADENPHLTQRHVERIVNTVFEEIIEALARGDRVELRGFGAFSVKARDARV
GRNPRTGEAVEVEDKKVPFFKTGKLLRDRLNTK
NT seq 282 nt   +upstreamnt  +downstreamnt
atgatccgatcggaactgatccagaaaatagccgacgagaatcctcacctcacccagcgc
catgtcgagcggatcgtgaacacggtcttcgaggagatcatcgaggctctggcccgtggc
gaccgggtggagctgcgcggattcggcgcattctcggtcaaggcccgggatgccagagtc
ggccgcaacccgagaacgggtgaagctgtcgaagtcgaagacaagaaggttcccttcttc
aaaaccggcaagctgctgcgtgatcgcctgaacacgaagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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