KEGG   Runella slithyformis: Runsl_3158
Entry
Runsl_3158        CDS       T01553                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
rsi  Runella slithyformis
Pathway
rsi00470  D-Amino acid metabolism
rsi00550  Peptidoglycan biosynthesis
rsi01100  Metabolic pathways
rsi01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rsi00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Runsl_3158
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Runsl_3158
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Runsl_3158
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rsi01011]
    Runsl_3158
Enzymes [BR:rsi01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Runsl_3158
Peptidoglycan biosynthesis and degradation proteins [BR:rsi01011]
 Precursor biosynthesis
  Amino acid ligase
   Runsl_3158
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp ATP-grasp_4 GARS_A
Other DBs
NCBI-ProteinID: AEI49539
UniProt: A0A7U4E6P4
Position
complement(3689513..3691183)
AA seq 556 aa
MRIGIFFGGPAREREISYAGGKTAYENMDKALFTPVLVFVDSLGNFILTDESTLYHSGIR
AFYPGPAFREGGFEVYIESLQQQLSPAELEALMHGIGTPIQPQDFKKYFDFAFIILHGPD
CEDGAIQGLMEWHKMPYMGPGLLGSAVSIDKILQNEQIARANGQEKKMAVVRWEEWHGAD
ISQKFEEAKAAVGLPIVVKAPHQGSSIGVAIVKEDSADAFAKAVNQCFFSLEIRADDWRS
WSEAEKHTFAQRIGNLDESIGYPVVIQETQETIYHPLDLLDKLDASLHSSFTLLSINAED
QVLLEEFMTGQEFSCGVIQDNDGTVIALPPTEIAKMDENQTFDFKTKYKLNVTRKFIPVR
TALENNQKIQYNIALVFEKLGMNAVARIDGFLTPDGRVLLHDPNTLPGMSPTSLIFKQMA
EIGLDVTHAITYLIRQSLRERIRTGKDTIHLRKLLSTLDADIAQKLAERTLQNVEFEATT
EAYMEARRTFSQLSASGKVKPTAVLKISDDEKHELPVGLLFKDTIEDVLEMVAQPVHPLI
TETREKAKNITRRFVG
NT seq 1671 nt   +upstreamnt  +downstreamnt
gtgcgtatcggaatcttttttggcggacccgcgcgtgagcgcgaaatctcctatgcaggc
ggtaaaacggcctacgaaaacatggacaaagcactgtttacgcccgttttggtgtttgta
gacagtctcggtaattttatcctgaccgatgaatccaccctttaccattccggtattcgc
gctttttatccgggtcccgccttcagagaaggtggctttgaagtgtacattgaatcgttg
cagcagcaactttcgcccgccgaattggaggcgttgatgcacggcatcggcacgccgatc
caaccgcaggatttcaaaaaatatttcgattttgcctttattatcctccacggccccgac
tgcgaagacggtgccattcagggacttatggaatggcataaaatgccgtacatgggcccg
ggattattagggtcagcggtgagcattgataagatcctgcaaaatgagcaaattgcccgt
gccaacgggcaggagaaaaaaatggccgtggtgcgttgggaagaatggcatggggccgat
atctcacaaaaatttgaggaagctaaagcggccgttggattaccgattgtggtcaaagct
ccgcatcagggctcttccatcggcgtggcgatcgtgaaagaagacagcgcagatgccttt
gccaaagccgtcaatcaatgctttttttcgttggaaatacgggccgacgactggagaagt
tggtcagaggccgaaaaacacacctttgcccaacgcataggaaacctggacgagagcatc
ggttatcccgtagtgattcaggaaacgcaggaaactatttaccatcctctcgacctgttg
gataagctggacgcttcccttcattcttcatttaccttactttccattaatgcggaagat
caggtattgctggaagaatttatgaccggtcaggaattttcctgcggggtaattcaggac
aatgatggcactgtcattgcgctgccgccgaccgaaattgccaaaatggacgaaaatcag
acattcgatttcaagaccaaatacaagctgaacgttacgcggaagtttatcccggtcaga
actgccctggaaaacaatcaaaagattcaatacaacattgcgttggtgtttgagaaactg
ggcatgaatgccgtggcccgcattgacggatttcttactcccgacggacgcgtgctgctc
cacgaccccaatacactgccggggatgtcgccgacctcattgatcttcaaacagatggcc
gagatcggtctggacgtcacccatgccatcacctacctgattcgccaatccctgcgtgag
cgtatccgcacgggtaaagatacgattcatctgcggaagctgctctcgacgctggacgct
gacattgcgcagaaacttgctgaacgtacgttacagaacgtggaatttgaagccaccacg
gaagcctacatggaagcacgccgcacgttcagtcagctttctgcttcaggaaaggtaaag
ccaacggccgtgttgaagatcagcgacgacgaaaaacacgaattgcccgtcggtctgttg
tttaaggatacgattgaagatgtgctggaaatggttgctcaacccgttcatccgctcatc
accgaaacccgcgaaaaagcaaagaatatcacccgtcgttttgtggggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system