KEGG   Cereibacter sphaeroides KD131: RSKD131_2336
Entry
RSKD131_2336      CDS       T00844                                 
Name
(GenBank) DNA topoisomerase I protein
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
rsk  Cereibacter sphaeroides KD131
Brite
KEGG Orthology (KO) [BR:rsk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rsk03032]
    RSKD131_2336
   03400 DNA repair and recombination proteins [BR:rsk03400]
    RSKD131_2336
Enzymes [BR:rsk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     RSKD131_2336
DNA replication proteins [BR:rsk03032]
 Prokaryotic type
  DNA Topoisomerases
   RSKD131_2336
DNA repair and recombination proteins [BR:rsk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RSKD131_2336
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact RE_XamI
Other DBs
NCBI-ProteinID: ACM02196
UniProt: B9KN90
Position
1:2372369..2373403
AA seq 344 aa
MKDGCVLVEMSDGSEAIVPRGLVYVTDAEPGITRRRCGRGFVFRGPDGRLLDRAERARIL
RLGVPPAYEKVWICPLENGHLQATGYDARGRKQYRYHPDWGSWRSQAKYALLPAFGEALP
RLRRRVARDLKAEAGELAFSLAALTMLIDRTFLRVGSSAYAEENKTFGATTLLARHVKLK
DGEVRLDFRAKGGKRVRQVLKDRRLHRILQEIEDLPGRNLFTWIDEEGQVRRVASHHVND
YLAEATGLAGASAKTFRTWGGSLAAFAVARATEGKLTVKMMAEGAAERLHNTPTISRTSY
IHPRILGLADLKPDERTAQLEAVQPADLPDLRSDERRMLGFLLG
NT seq 1035 nt   +upstreamnt  +downstreamnt
gtgaaggatggctgcgttctggtcgagatgtcggacggcagcgaggccatcgtgccgcgc
ggcctcgtctatgtcaccgatgccgagcccggcatcacccggcggcgctgcgggcgcggc
ttcgtcttccgcggccccgacggcaggcttctggaccgcgccgagcgcgcacgcatcctg
cgcctcggggtcccgcccgcctacgagaaggtgtggatctgcccgctcgagaacggccac
ctgcaggccaccggctacgatgcccgcgggcgcaagcaatatcgctaccatcccgactgg
ggcagctggcggtcgcaggcgaaatacgccctcctgccggccttcggcgaggcgctgccc
cgcctgcgccgccgcgtggcccgcgacctcaaggccgaggcgggcgagctcgccttctcg
ctcgcggccctcaccatgctgatcgaccggaccttcctgcgcgtgggcagctcggcctat
gccgaggagaacaagaccttcggcgccaccacccttctggcgcgccatgtgaagctcaag
gacggcgaggtgcggctcgacttccgcgccaagggcggcaagcgcgtgcgtcaggtgctg
aaggaccgccgcctgcaccgcatcctgcaggagatcgaggatctgccgggccgcaacctc
ttcacctggatcgacgaggagggccaggtgcggcgcgtggcttcgcaccatgtgaacgac
tatctggccgaggccacgggccttgcgggtgcttccgccaagaccttccgcacttggggc
ggctcgctcgccgccttcgccgtggcgcgggcgaccgagggcaagctcaccgtgaagatg
atggccgaaggtgcggccgagcggctgcacaacacgccgacgatcagccgcacctcctac
attcatccccggatcctcggcctcgcggacctgaagcccgacgagcgcacggctcagctc
gaggcggtccagcccgccgacctgcccgacctgcgcagcgacgagcgccggatgctcggc
ttcctgctgggctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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