KEGG   Cereibacter sphaeroides KD131: RSKD131_4143
Entry
RSKD131_4143      CDS       T00844                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
rsk  Cereibacter sphaeroides KD131
Pathway
rsk03420  Nucleotide excision repair
rsk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rsk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RSKD131_4143
   03430 Mismatch repair
    RSKD131_4143
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsk03400]
    RSKD131_4143
Enzymes [BR:rsk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RSKD131_4143
DNA repair and recombination proteins [BR:rsk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RSKD131_4143
   MMR (mismatch excision repair)
    Other MMR factors
     RSKD131_4143
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_11 AAA_12
Other DBs
NCBI-ProteinID: ACM04003
UniProt: B9KVC5
Position
2:complement(1083997..1086036)
AA seq 679 aa
MAYLERLNERQRQAVEFGVSGTQPAPPLLVIAGAGSGKTSTLAHRVAHLLVKGADPRRIL
LMTFSRRAAAELTRRVERITRHALGQAHAAEALTWAGTFHGIGARILRENAALIGLNPDF
TIHDREDSADLMNLVRHGLGLSKTESRFPAKGTCLAIYSRAVNAEEPLADVLRAHFPWCA
AWEGELRRLFSGYVAAKQAQNVLDYDDLLLAWAQVMAEPAFAAHLGAAWDHVLIDEYQDT
NRLQARILLALKPDGRGLTVVGDDAQAIYAFRAATVRNILDFPAAFAPPAHVVTLDRNYR
STAPILAAANRVIERAAERFTKDLWTERASAEKPRLVTLATEADQARFFVDEVLRNREEG
MRLKDQAVLFRTSSHSGQIEVELTRRNVPFVKFGGLKFLDSAHVKDLLAILRFAQNPRDR
VAGFRVLQLVPGVGPASAGRALEALAAAADPLAALARLRPPPRAGADWTALAEALPRLGS
DWPAGLAQARAWYEPQLDRLHEDAEVRRADLLQLEQIAAGYPSRERFLTDLALDPPDATG
GQAGVPLKDEDYLILSTIHSAKGQEWRAVHLLNVVDGCIPSDLGTGSSAEIEEERRLLYV
AMTRAKDRLVLGVPQRFYVTGQARHGDRHVHAMRSRFLPRDLLDAFEVTHWCPPLAEGAR
AVPAPPPINVAARLRGMWS
NT seq 2040 nt   +upstreamnt  +downstreamnt
gtggcctatctcgagagactgaacgagcggcagcggcaggcggtcgagttcggcgtgagc
gggacgcagcccgcgccgccgctgctggtaatcgcgggcgcgggctcgggcaagacgtcg
acgctcgcgcacagggtggcgcatcttctggtgaagggcgccgatcctcggcgcatcctg
ctcatgaccttctcgcggcgcgcggcagccgaactcacgcggcgggtcgagcgaatcacc
cgccacgccctgggtcaggcccatgccgccgaggcgctcacctgggccggcaccttccac
ggcatcggcgcccggatcctgcgcgagaacgcggccctgatcgggctgaaccccgatttc
accatccacgaccgagaggattccgccgatctgatgaacctcgtccgccatgggctgggc
ctctcgaagaccgaaagccgctttcccgccaagggcacctgccttgcgatctactcgcgc
gcggtcaatgcagaggagccgctcgcggacgtgctgcgcgcccatttcccctggtgtgcc
gcctgggaaggcgagctgcggcggctcttttccggctatgtcgcggccaagcaggcgcag
aatgtgctcgattacgacgatctcctgctcgcctgggcgcaggtgatggccgagcccgcc
tttgctgcccatctcggcgccgcgtgggatcatgtgctgattgacgaatatcaggacaca
aacaggctgcaggcgcggatcctgctggcgctgaagccggacgggcgcgggctgaccgtc
gtgggcgacgatgcgcaggcgatctatgccttccgcgcggccaccgtgcggaacatcctc
gactttcccgcagccttcgctcccccggcgcatgtggtgacgctcgaccgcaactatcgc
tcgaccgcgcccattcttgcggccgcgaaccgcgtgatcgagcgggccgccgagcgcttc
acaaaggatctgtggacagagcgcgcctcggccgagaagccgcgcctcgtgacgctcgcc
accgaggccgatcaggcgcgcttcttcgtcgacgaggtgctgcgcaaccgcgaggaaggg
atgcggctcaaggatcaggcggtgctgttccgcacttcgagccattccggccagatcgag
gtggagttgacccgccgcaacgtgcccttcgtgaagttcggcgggctgaagttcctcgat
tccgcccatgtgaaggatctgctggcgatcctgcgcttcgcgcagaacccgcgcgaccgg
gtggcgggcttccgcgtgctccagctcgtgccgggcgtggggccggcctcggcgggccgc
gcgctcgaggctctcgcggccgcggccgatcccttggcggcgctggcgcgcctccgcccg
ccgccgcgcgctggcgcagactggaccgcgctcgccgaggcgctgccgcggctcgggtcg
gactggcctgccggactggcgcaggcccgcgcctggtatgagccgcagctcgaccggctg
cacgaggatgccgaggtgcggcgggccgatctcctccagctcgagcagatcgcggccggc
tatccctcgcgcgagcggttcctgaccgatctggcgctcgatccgcccgacgcgaccgga
gggcaggccggcgtgccgctgaaggacgaggattacctgatcctctcgaccatacattcg
gccaaggggcaggagtggcgggccgtgcatcttctgaatgtggtcgatggctgcatcccc
tcggatctggggacgggcagctcggccgagatcgaggaggagcggcggctcctctatgtg
gcgatgacgcgggccaaggaccggctggtgctgggcgtgccgcagcggttctacgtcacc
gggcaggctcggcacggcgacaggcatgtccatgcgatgcgcagccgcttcctgccgcgc
gacctgctcgatgccttcgaggtcacgcactggtgcccgccgcttgcggaaggggcgcgg
gccgtgcccgctccgccgccgatcaacgtggccgcccgcctgcgcgggatgtggagttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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