KEGG   Ralstonia solanacearum CMR15: CMR15_10411
Entry
CMR15_10411       CDS       T02725                                 
Name
(GenBank) putative RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
rsm  Ralstonia solanacearum CMR15
Brite
KEGG Orthology (KO) [BR:rsm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rsm03021]
    CMR15_10411
Transcription machinery [BR:rsm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CMR15_10411
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 Sigma70_ECF HTH_23 DUF134
Other DBs
NCBI-ProteinID: CBJ36620
Position
439343..439876
AA seq 177 aa
MSDLAGRLIALTPRLRRHARGLVGDAARADDLVQDTLERAWRYRWRFQLRPRLGAAGEGD
GLFAWLLTIMHRLHLNAVRRPDRLELTDAPPDIPVSDDPGLRRDLLQALASLPDDQRAVL
LLVGLEQLAYREAADVLGVPLGTVMSRLSRARERMRVALDGAPVTSGDSGTTLHRVK
NT seq 534 nt   +upstreamnt  +downstreamnt
atgtccgacctcgccggccgcctgatcgcgctgacgccgaggctgcggcgccacgcgcgc
ggcctggtgggcgacgccgcccgcgccgacgatctcgtacaggacacgctggaacgcgcc
tggcgttaccgctggcgcttccagctgcgcccgaggctcggtgccgcgggcgagggcgac
gggctgttcgcgtggctgttgaccatcatgcaccgcctgcacctgaacgccgtgcgccgg
ccggaccggctggagctgaccgatgcgccgcccgacattcccgtcagcgatgacccgggc
ctgcgtcgcgacctgctgcaggcgctggcatcgctgcccgacgatcagcgtgcggtgctg
ctgctggtcggactggagcaactggcctaccgcgaggccgccgacgtgctgggcgtgccg
ctgggcacggtgatgtcgcggctgtcgcgggcgcgcgaacgcatgcgggtggcgctcgat
ggcgcgcccgtcacatcgggcgacagcggcacgacgctgcaccgcgtgaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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