KEGG   Ralstonia solanacearum Po82: RSPO_c02327
Entry
RSPO_c02327       CDS       T02005                                 
Symbol
rne
Name
(GenBank) ribonuclease e (rnase e) protein
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
rsn  Ralstonia solanacearum Po82
Pathway
rsn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rsn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RSPO_c02327 (rne)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsn03019]
    RSPO_c02327 (rne)
   03009 Ribosome biogenesis [BR:rsn03009]
    RSPO_c02327 (rne)
Enzymes [BR:rsn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     RSPO_c02327 (rne)
Messenger RNA biogenesis [BR:rsn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     RSPO_c02327 (rne)
Ribosome biogenesis [BR:rsn03009]
 Prokaryotic type
  rRNA processing factors
   RSPO_c02327 (rne)
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: AEG69623
UniProt: F6G3C9
Position
2435431..2438472
AA seq 1013 aa
MKRMLFNATQQEELRVAIVDGQKLIDIDIETAGREQRKGNIYKGVITRIEPSLEACFVNY
GEERHGFLPFKEVARAYFKDGVDVRTARIQDALTEGQELIVQVEKEERGNKGAALTTFIS
LAGRYLVLMPNNPRGGGVSRRIEGEDRQELRETMAQLQVPEGMSIIARTAGIGRSAEELQ
WDLNYLMQLWKAVDGAATENRAPLLIYLESSLVIRAIRDYFQPDIGEILIDTDDIYDQAR
AFMSVVMPDNMNRVKKYRDDVPLFSRFQIEHQIESAYSRMVMLPSGGAIVIDHTEALVAV
DVNSARATKGADIEETALRTNLEAADEIARQLRLRDLGGLIVIDFIDMESSKAQKDVETR
LKDALRHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQ
VLRIIQEEAMKENTAAIHCQVPVEVAAFLLNEKRPDINLIETRFKVNVLLIPNKHLETPH
YKLERLRHDDPRLDDNKASYKMAEEAAKELEADTAYSTRKEAAKPRQEAAVKGITPEQPA
PVSVPRAERPARAEVTPAAAPQASAPVPAQGGFMSWLKSLFGGKPAEPTVAAPVETPKRA
EDGSRRDRGNRQERGGRSGQRGERGERGERQGQQGGRDGQRQGRDGSRNEARDGQAQREA
QRESQRGNRERNRQPAETTDRETVEARQPQQGQEAREGQGRRERNQERRERAPREGREGG
RESREGRESREPREGRDSRERDAQQAKEAASAAAPAAVADLIDPTAAAQVPQALVDATMP
AEAITTEGAAPGTEGTGEGEERRRRGRRGRNRYRRDREGAEGVRAEDETEDEGETAATEP
ATATQPAVEAVQPAAPVVHETVTEPVQTPAPAAIEMAVPAVQTPVHAVEAETVAPVPAQP
AAQPAEPVAAVAATPATEPAADTIVTASAEVPAPVSTVAQVSPLPIGTLQAVVADAGMTW
VHTDSQKLQAAQEEAARTVTPPRVPRERKPLPPIQQGPMVLVETNRPAGGTDQ
NT seq 3042 nt   +upstreamnt  +downstreamnt
atgaaacgcatgttgttcaatgcgacgcagcaagaagagttgcgcgtcgccattgtcgat
ggccagaaactgatcgacatcgacatcgagaccgccggccgcgaacagcgcaaaggcaat
atctacaagggtgtcatcacccgcatcgaaccgtcgctggaggcctgcttcgtcaactac
ggcgaagaacggcacggtttcctccccttcaaggaagtcgcccgcgcctacttcaaggac
ggcgtggatgtgcgcaccgcccgcatccaggacgcgctcaccgaaggccaggaactgatc
gtccaggtggaaaaggaagagcgcggcaacaagggcgcggcgctgaccaccttcatctcg
ctggccggccgctacctggtgctgatgccgaacaacccgcgcggcggcggcgtgtcgcgc
cggatcgaaggtgaagaccgccaggaactgcgcgaaaccatggcgcagctgcaagtcccg
gaaggcatgagcatcattgcccgcactgccggcatcggccgctcggccgaagagctgcag
tgggacctgaactacctgatgcagctgtggaaggcggtcgacggtgccgcgaccgagaac
cgggcgccgctgctgatctatctcgaatccagcctggtgatccgagccatccgcgattac
ttccagccggacatcggtgagatcctgatcgataccgacgacatctacgatcaggcccgc
gccttcatgagcgtggtgatgcccgacaacatgaatcgggtgaagaagtatcgcgacgac
gttcccctgttctcgcgcttccagatcgaacaccagatcgaatcggcctattcgcgcatg
gtgatgctgccctcgggcggcgctatcgtgatcgaccacaccgaggcgctggtcgccgtc
gacgtgaactcggcgcgcgccaccaagggtgcggacatcgaggaaaccgcgctgcgcacc
aacctcgaagccgccgacgagatcgcccgccagttgcgcctgcgcgacctcggcggcctg
atcgtgatcgacttcatcgacatggagtcgagcaaggcccagaaggacgtcgagacccgc
ctgaaggacgcgctgcgccatgaccgcgcccgcgtgcagatgggcaagatcagccgcttc
ggcctgatggagctgtcgcgccagcgcctgcgtccgtcgctgtcggagggctcgcatgtc
acctgcccgcgctgcaacggcacgggccacatccgcgataccgaatcgtccgccctgcag
gtgctgcgcatcatccaggaagaggcgatgaaggaaaacaccgccgcgatccactgccag
gtgccggtggaagtggctgcgttcctgctcaacgagaagcgcccggacatcaacctgatc
gagacgcgcttcaaggtcaatgtgctgctgattccgaacaagcacctggaaacgccgcac
tacaagctcgagcgcctgcgtcacgacgatccgcgcctggacgacaacaaggccagctac
aaaatggccgaggaagccgccaaggaactggaagccgacaccgcctacagcacccgcaag
gaagccgccaagccgcgccaggaagcggcggtcaagggcatcacaccggaacagccggcc
ccggtctcggtaccgcgcgccgagcgtccggcccgtgccgaggtgactccggccgcagca
ccgcaagcgtcggccccggtgccggcacagggcgggttcatgtcgtggctcaagtcgctg
tttggcggcaagccggccgagccgacggtcgccgcccccgtcgagacgcccaagcgcgct
gaagacggcagccgccgcgaccgtggcaaccgccaggaacgtggcggccgcagcggccag
cgcggggaacgcggcgagcgtggcgaacgccagggccagcaaggcggccgcgacggccag
cgtcagggccgcgacggcagccgcaacgaagctcgcgacggccaggcccagcgtgaagct
caacgcgagagccagcgcggcaaccgcgagcgcaaccgccagccggccgaaaccaccgac
cgcgaaacggtcgaggcgcgccagccgcagcaaggccaggaggcacgcgaaggccagggt
cgccgcgaacgcaaccaggaacgccgcgagcgcgcaccgcgcgaaggtcgcgaaggtgga
cgcgaaagccgcgaaggacgtgagagccgcgaaccgcgcgaaggacgcgacagccgtgag
cgcgatgcgcagcaggccaaggaagccgccagcgccgcagccccggccgcagtggcagac
ctgatcgatccgaccgctgccgcccaggtgccgcaagcgctggtggacgcgaccatgccc
gccgaggcaatcaccaccgagggtgcagcgcctggcacggaaggcaccggcgagggcgaa
gaacgccgccgccgcggtcgccgtggccgcaaccgctatcgccgtgaccgtgagggcgcg
gaaggcgtgcgcgctgaggatgaaaccgaggacgaaggcgaaaccgccgccactgagccg
gcaacggcaacccagcctgcggtggaagccgtccagccggcagccccggtcgtgcacgaa
accgtgacggagcctgtgcagacgcccgccccggcagcgatcgaaatggctgtgccggcc
gtgcagacgccggtgcatgcagttgaggccgagaccgtggcacccgttccggcgcagcct
gccgcacaaccggccgagccggtcgctgccgtggctgcaacgcctgcaacggaaccggcc
gccgacaccatcgtgacggcctctgccgaagtgccggcaccggtcagcacggtggcccag
gtttcgccgctgccgatcgggacgctgcaggccgtggtggccgacgccggcatgacgtgg
gtccacaccgactcgcagaagctgcaggcggcgcaggaagaagcggcccgcaccgtcacg
ccgccgcgcgtgccgcgtgagcgcaagcccctgccgccgatccagcagggaccgatggtc
ctggtcgaaaccaaccgtccggcgggcggcaccgaccagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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