KEGG   Ralstonia pseudosolanacearum GMI1000: RSc0500
Entry
RSc0500           CDS       T00071                                 
Symbol
ruvB
Name
(GenBank) probable holliday junction dna helicase ruvb protein
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
rso  Ralstonia pseudosolanacearum GMI1000
Pathway
rso03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rso00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    RSc0500 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rso03400]
    RSc0500 (ruvB)
Enzymes [BR:rso01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RSc0500 (ruvB)
DNA repair and recombination proteins [BR:rso03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     RSc0500 (ruvB)
    RecFOR pathway proteins
     RSc0500 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_16 AAA_3 nSTAND3 AAA_22 Rad17 AAA_14 AAA_18 RNA_helicase TsaE NTPase_1 AAA_17 Sigma54_activ_2 AAA_33 DUF815 AAA_28 AAA_25 NB-ARC Bac_DnaA bpMoxR IstB_IS21 NACHT AAA_19 AAA_24 ABC_tran Zeta_toxin AAA_PrkA
Other DBs
NCBI-ProteinID: CAD14028
UniProt: Q8Y236
Position
complement(534251..535324)
AA seq 357 aa
MIETDKLAAKAVSAERLISASPASPNEEAFERALRPKLLDEYVGQEKVRGQLDIFMTAAK
KRREALDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERPGDLAALLTNLEANDV
LFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTN
PLRDRFGIVARLEFYTPTELARIVTRSAGLLDARIAEDGALEIAKRSRGTPRIANRLLRR
VRDYAEVKADGVITRAVADAALAMLDVDAVGFDLMDRKLLEAILHKFNGGPVGIDNLAAA
IGEERDTIEDVLEPYLIQQGYLQRTPRGRVATASAYQHFGLGAPKTGPARDLWDNNA
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgatcgaaaccgacaagctcgccgccaaggccgtctccgctgaacgcctgatctcggcc
tcgcccgcctcccccaacgaggaggcattcgagcgcgcgctgcgccccaagctgctcgac
gaatacgtcggccaggaaaaggtgcgcggccagctcgatatcttcatgacggcggccaag
aagcgccgcgaggcgctcgaccacgtgctgctgttcggcccgccgggcctgggcaagacg
acgctggcgcacatcatcgcccgcgagatgggcgtcaacctgcgccagacctcgggcccc
gtgctggagcgcccgggcgacctggccgcgctgctgaccaacctcgaagccaacgacgtc
ctcttcatcgacgagatccatcgactctcgccggtggtggaggaaatcctgtatccggcg
ctcgaggactaccagatcgacatcatgatcggcgaaggcccggcagcccgctcggtcaag
ctcgatctgcagccgttcacgctggtgggcgccaccacgcgcgccggcatgctgaccaac
ccgctgcgcgaccgcttcggcatcgtcgcccggctcgagttctatacgccgacggagctc
gcgcgcatcgtcacgcgctcggccggcctgctcgacgcgcgcatcgccgaagacggcgcg
ctggagatcgccaagcgctcgcgcggcacgccccgcatcgccaaccgcctgctgcgccgc
gtgcgcgactacgctgaagtgaaagccgacggcgtcatcacccgcgcggtggccgacgcg
gcgctggcgatgctcgacgtggatgcggtcggcttcgacctgatggaccgcaagctgctg
gaagccatcctgcacaagttcaacggcggcccggtcggcatcgacaacctggccgccgcc
atcggcgaggagcgcgacaccatcgaagacgtgctcgagccctacctgatccagcagggc
tacctgcagcgcacgccgcgcgggcgcgtcgccacggcatcggcctaccagcacttcggg
ctgggcgcgccgaagaccggtccggcgcgcgacctgtgggacaacaacgcctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (33)   
   Pfam (33)   
All databases (56)   

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