KEGG   Ralstonia pseudosolanacearum GMI1000: RSc2230
Entry
RSc2230           CDS       T00071                                 
Symbol
polA
Name
(GenBank) probable dna polymeraseIprotein
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rso  Ralstonia pseudosolanacearum GMI1000
Pathway
rso03030  DNA replication
rso03410  Base excision repair
rso03420  Nucleotide excision repair
rso03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rso00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RSc2230 (polA)
   03410 Base excision repair
    RSc2230 (polA)
   03420 Nucleotide excision repair
    RSc2230 (polA)
   03440 Homologous recombination
    RSc2230 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rso03032]
    RSc2230 (polA)
   03400 DNA repair and recombination proteins [BR:rso03400]
    RSc2230 (polA)
Enzymes [BR:rso01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RSc2230 (polA)
DNA replication proteins [BR:rso03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     RSc2230 (polA)
DNA repair and recombination proteins [BR:rso03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     RSc2230 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RSc2230 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: CAD15937
UniProt: Q8XX86
Position
complement(2418536..2421376)
AA seq 946 aa
MGMSESQETLLLVDGSSYLYRAYHALPDLRNGEGFPTGAIYGIVNMLRKLRNDYPAKYSA
CVFDAKGKTFRDELYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWPILMVDGVEADDVIG
TLAERAAREGIRTVVSTGDKDLAQLVNDHVTLVNTMSNETLDPAGVLAKFGVPPGKIVDY
LSLIGDTVDNVPGVPKVGPKTAVKWLGEYGSLDSVIARAGEIKGVVGENLRNTLDWLPKG
RELLTVKTDCDLATEVPTFEALVDGGEDRAKLVDFFGRYGFKTWLREASGESLPDTRSVG
AARKAATPVKQYAPEAAAQPQAGLFDVEAPPAEVKYETVTTEAQLESWMRLLDASELVCI
DTETTSIDPMLAQLVGLSLSVEPGQACYIPVAHRGPDVSGLDAAGQLSREAVLARMKPWL
EDAARKKVGQHLKYDAHVFANHGIALRGIAHDTMLQSYVLASHRNHGMDALAERVLHLKT
ITYEEVCGKGASQIGFDEVPLDRATEYAAEDADITLRLHRALYPKVAEDDKLRYVYEQIE
MPTSIVLQKMERNGVLIDAERLARQSTGLGQRLLELEQQAYALAGQPFNLNSPKQIGEIF
FTQLKLPVIKKTASGAPSTDEEVLQKLAEDYPLPKLLLDFRGLAKLKSTYTDKLPKMVNP
QTGRVHTTYGQATAVTGRLASTDPNLQNIPVRTEEGRRIREAFVAPAGSVIVSADYSQIE
LRIMAHLSEDEGLLRAFREGQDVHRATAAEVFGVTPLEVTAEQRRYAKVINFGLIYGMSA
FGLASNLGIGRDAAKLYIDRYFARYPGVARYMDETRLVAHERGYVETVFGRRLWLPDING
GNGPRRQAAERAAINAPMQGTAADLIKLSMLAVQDWLDGSPSAGKPGAPMRTRQVMQVHD
ELVLEVPQEELSLVRERLPELMCGVASLRVPLVAEVGVGANWEEAH
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgggaatgtcggaaagtcaagaaacgctgttgctcgtcgatggctcgagttatctgtac
cgtgcttatcacgcactgcccgacttgcgcaatggagaagggtttcctaccggggccatc
tacggcatcgtgaacatgctgcgcaagctgcgcaacgactacccggccaagtatagcgct
tgcgttttcgacgctaaaggcaagaccttccgcgacgaactgtaccccgcctacaaggag
caccgggcgccgatgcccgatgacctgcgccagcagatcgagccgatccacgaagccgtg
cgcgcgctcggctggcccatcctgatggtcgacggcgtggaggccgacgacgtgatcggc
acgctggccgaacgcgccgcccgggagggcatccgcaccgttgtctcgaccggcgacaag
gacctcgcccaactggtgaacgaccatgtcacgctggtcaacaccatgagcaacgagacg
ctcgatccggccggcgtgctggccaagttcggcgtgccgcccgggaagatcgtcgattac
ctgtcgctgatcggtgacaccgtggacaatgtgccgggcgtgcccaaggtcggcccgaag
acggcggtcaagtggctgggcgaatacggctcgctcgacagcgtgattgcccgcgccggc
gagatcaagggcgtggtcggcgagaacctgcgcaacacgctcgactggctgcccaagggc
cgcgagctgctgaccgtgaagaccgactgcgatctcgccacggaagtcccgaccttcgag
gccctcgtcgatggcggcgaggatcgcgccaagctggtcgacttcttcggccgctacggc
ttcaagacctggctgcgcgaggccagcggcgaatcgctgccggatacccgcagcgtgggc
gcggcgcgcaaggccgccacgcccgtcaagcaatacgcaccggaggccgcggcgcagccg
caggccggcctgttcgacgtcgaagcgccgccggccgaagtcaaatacgaaaccgtcacc
accgaagcgcagctcgaatcgtggatgcggttgctggatgcgtccgagctggtctgcatc
gacaccgagaccacctcgatcgatccgatgctggcccagctggtgggcctttcgctgtcg
gtcgagccgggccaggcgtgctacatcccggtcgcgcatcgcggccccgatgtgtcgggg
ctggacgccgccgggcagctctcacgcgaggccgtgctggcgcgcatgaaaccgtggctg
gaggacgcggcccgcaagaaggtcggccagcatctgaagtacgacgcgcacgtgttcgcc
aaccatggcatcgcactgcgcggcatcgcgcacgacaccatgctgcagtcgtacgtgctg
gcctcgcaccgcaaccacggcatggacgcgctggccgagcgcgtgctgcacctgaagacc
atcacctacgaagaggtctgcggcaagggcgcgtcgcagatcggcttcgatgaggtgccg
ctcgaccgcgccacagaatacgccgccgaggacgccgacatcacgctgcgcctgcaccgc
gcgctgtatcccaaggtggccgaggacgacaagctgcgctacgtctacgagcagatcgag
atgccgacctccatcgtgctgcagaagatggagcgcaacggcgtgctgatcgatgccgag
cgcctggccagacagagcaccgggctgggccagcgcctgctggagctcgagcagcaggcc
tatgcgctggccggccagccgttcaatctgaactcgcccaagcagatcggcgagatcttc
ttcacgcagctcaagctgccggtcatcaagaagaccgccagcggtgcgccgtcgaccgac
gaagaggtgctgcagaagctggccgaggactacccgctgcccaagctgctgctcgatttc
cgcggcctggccaagctcaagtccacctataccgacaagctgccgaagatggtcaatccg
cagaccggccgggtccacaccacctacgggcaggcgaccgccgtcacgggccggctggcc
tcgaccgacccgaacctgcagaacatcccggtgcgcacggaagaagggcggcgcatccgc
gaagcgttcgtcgcgccggcgggcagcgtgatcgtctcggccgactactcgcagatcgag
ctgcgcatcatggcccacctgtccgaggacgaaggcctgttgcgcgccttccgcgagggc
caggacgtgcaccgcgccaccgcggccgaagtcttcggtgtgacgccgctggaggtcacg
gccgaacagcgccgctacgccaaggtcatcaacttcggcctcatctacggcatgagcgcg
ttcgggctggcgagcaacctcggcatcggccgcgatgccgccaagctttatatcgaccgg
tatttcgcgcgctatcccggcgtggcccgctacatggacgagacccgcctggtcgcgcac
gaacgcggctacgtcgagacggtgttcggccgccgcctgtggctgcccgacatcaacggc
ggcaacggtccgcgccgccaggccgccgagcgcgccgccatcaatgcgcccatgcagggc
accgccgccgacctcatcaagctgtcgatgctggccgtgcaggactggctggacggctcg
cccagcgccggcaagcccggcgcgccgatgcgcacgcgccaggtcatgcaggtgcacgat
gaactggtgctggaagtcccgcaggaagagctgtcgctggtgcgcgagcgcctgcccgag
ctgatgtgcggcgtggcgtcgctgcgtgtgccgctggtggccgaggtgggcgtcggcgcg
aactgggaagaggcgcactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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