KEGG   Cereibacter sphaeroides 2.4.1: RSP_1739
Entry
RSP_1739          CDS       T00284                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
rsp  Cereibacter sphaeroides 2.4.1
Pathway
rsp03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    RSP_1739 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rsp03021]
    RSP_1739 (rpoA)
   03400 DNA repair and recombination proteins [BR:rsp03400]
    RSP_1739 (rpoA)
Enzymes [BR:rsp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     RSP_1739 (rpoA)
Transcription machinery [BR:rsp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     RSP_1739 (rpoA)
DNA repair and recombination proteins [BR:rsp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      RSP_1739 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2 DUF211
Other DBs
NCBI-ProteinID: ABA77886
UniProt: Q3J5P8
Position
1:320720..321736
AA seq 338 aa
MIHKNWAELIKPTQLVVKPGADPARVATVIAEPLERGFGLTLGNALRRVLLSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVSIKMEVEGPKRLSISAKGPGVVTAGDISE
SNGIEILNKDHVICHLDEGADVFMELTVNTGKGYVAADKNRPEDAPIGLIPIDAIYSPVK
KVSYEVTPTREGQVLDYDKLTMRIETDGGLTPDDAVAYAARILQDQLSIFVNFEEPESAT
RHDVEDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPENIEDLAKRFEDQF
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgatccacaagaactgggccgagctgatcaagccgacgcagctggtcgtcaagccgggt
gccgatccggcccgggtcgccaccgtgattgcggagccgctcgagcgcggcttcggtctg
acgctgggcaacgcgctgcgccgcgtgctgctctcgtcgcttcagggggccgccatcacc
tccgtccagatcgacaacgtgctgcacgagttctcgtcggtggccggtgtccgtgaggat
gtgaccgacatcgtcctgaacctgaagggcgtctcgatcaagatggaggtcgagggccct
aagcgtctgtcgatctccgccaaagggccgggcgtcgtcaccgcgggcgacatctcggaa
tcgaacggcatcgagatcctgaacaaggatcatgtcatctgccacctcgacgagggggcg
gacgtgttcatggagctgaccgtgaacaccggcaagggctatgtcgcggcagacaagaac
cgtcccgaggatgcgccgatcggcctcattccgatcgacgcgatctactcgccggtgaag
aaggtgagctacgaagtcacgccgacccgcgagggccaggtgctcgactatgacaagctc
accatgcggatcgaaaccgacggcggcctgaccccggacgatgcggtggcctatgccgcg
cgcatcctgcaggatcagctgtcgatcttcgtcaacttcgaagagccggaatcggccacc
cgccacgacgtggaggatgggctcgagttcaacccgctgctcctcaagaaggtggacgag
ctcgaactgtcggtccgctcggcgaactgcctcaagaacgacaatatcgtctatatcggc
gatctcatccagaagaccgaagccgagatgctccgcaccccgaacttcggccgcaagtcg
ctcaacgagatcaaggaagtgctctcgggcatgggtctgcacctcggcatggatgtcgag
gactggccgccggagaacatcgaggatctggccaagcgcttcgaagaccagttctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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