KEGG   Cereibacter sphaeroides ATCC 17025: Rsph17025_0359
Entry
Rsph17025_0359    CDS       T00512                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
rsq  Cereibacter sphaeroides ATCC 17025
Pathway
rsq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rsq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Rsph17025_0359
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsq03019]
    Rsph17025_0359
Messenger RNA biogenesis [BR:rsq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Rsph17025_0359
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22
Other DBs
NCBI-ProteinID: ABP69265
UniProt: A4WPF1
Position
complement(353146..354507)
AA seq 453 aa
MPACRKMTMADFSTLGLSEKILQGLAKAQFTKATPIQVEAIPHVMQGRDLMGLAQTGTGK
TLAFGLPLLHRLLGVGHPPPPRTIRALILAPTRELVSQIAANLELFTKGTPVKVVTITGG
ASINRQTERLARGADIMVATPGRLIDLLDRNAVVLDHTGYLVLDEADQMLDMGFIHSLRK
IARFLPLKRQTLLFSATMPKLIEELAHTFLREPVRVQVAPPGKPVEKIAQGVHFIPQGDK
AKLLESYLLKHPGEQALVFGRTKHGSEKLMKLLVSWGFKAGSIHGNKSQNQRDRTLTEFR
DGTLDVLVATDVAARGIDIPGVRHVYNYDMPNVPENYVHRIGRTARAGAEGSAVAFVAPA
EMDEFRAVEKLLKQPIPVIGGAPWAADIVAAAPRPGQKPRQGGRPRAAGKPQGKPQGQAK
AHPRAGRASGVPGGQAAPKRPQRGPRRSEAARG
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgcccgcctgccgaaagatgaccatggctgatttcagcacgctcgggctgtccgagaag
attcttcagggccttgccaaggcccagttcaccaaggccaccccgatccaggtcgaggcg
atcccgcatgtcatgcaggggcgcgacctgatgggcctggcccagaccggcaccggcaag
acgctggccttcgggctgccgctcttgcaccgcctgctgggcgtcggccacccgccgccg
ccgcgcaccatccgcgcgctgatccttgcgcccacgcgcgaactggtgagccagatcgcc
gccaacctcgagctgttcaccaagggcacgccggtcaaggtcgtcaccatcaccggcggc
gcctcgatcaatcgccagaccgagcggctggcgcgcggggcggacatcatggtggccacg
ccgggccgcctcatcgacctgctcgaccgcaacgcggtggtgctcgatcatacgggctat
ctggtgctggacgaggccgaccagatgctcgacatgggcttcatccactccctgcggaag
atcgcgcgcttcctgccgctcaagcggcagacgctgctgttctcggccaccatgccgaag
ctgatcgaggagctggcccacaccttcctgcgcgagccggtccgcgtgcaggtggccccg
cccggcaagccggtcgagaagatcgcgcagggcgtgcacttcatcccgcagggtgacaag
gccaagctgctggagagctacctgctcaagcatccgggcgagcaggcgctggtcttcggc
cgcaccaagcacggctcggaaaagctgatgaagctgctggtcagctggggcttcaaggcg
ggctcgatccacggcaacaagagccagaaccagcgtgaccgcaccctgaccgagttccgc
gacggcacgctcgacgtgctggtggccaccgatgtggcggcccgcggcatcgacattccg
ggcgtgcgccacgtctacaactacgacatgccgaacgtgcccgagaactacgtccaccgg
atcggccgcaccgcccgcgccggcgccgagggcagcgccgttgccttcgtggccccggcc
gagatggatgagttccgcgcggtcgagaagctgctgaagcagccgatcccggtcattggt
ggcgcgccctgggcggccgacatcgtggccgccgcaccccgtccggggcagaagccgcgg
cagggcggccgtcccagggccgccggcaagccgcagggcaagccgcagggtcaggcgaag
gcgcatccgcgggccggacgtgcctcgggcgtgcccggtggacaggcggcgcccaagcgt
ccccaacgcggtccgcgtcgcagcgaagccgctcgcggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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