KEGG   Cereibacter sphaeroides ATCC 17025: Rsph17025_2316
Entry
Rsph17025_2316    CDS       T00512                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
rsq  Cereibacter sphaeroides ATCC 17025
Brite
KEGG Orthology (KO) [BR:rsq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rsq03032]
    Rsph17025_2316
   03400 DNA repair and recombination proteins [BR:rsq03400]
    Rsph17025_2316
Enzymes [BR:rsq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Rsph17025_2316
DNA replication proteins [BR:rsq03032]
 Prokaryotic type
  DNA Topoisomerases
   Rsph17025_2316
DNA repair and recombination proteins [BR:rsq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Rsph17025_2316
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim zf-C4_Topoisom Toprim_4
Other DBs
NCBI-ProteinID: ABP71205
UniProt: A4WUZ1
Position
complement(2359657..2362299)
AA seq 880 aa
MAVVVVESPAKAKTINKYLGSDYTVLASYGHVRDLPAKDGSVDTEHEFAMTWEVAADSKK
HVRAIAEALKTDDTLILATDPDREGEAISWHLQEALASSLKKGKTVSRVTFNAITKAAVT
EAMKAPRQVDTALVEAYLARRALDYLVGFTLSPVLWRKLPGAKSAGRVQSVCLRLIVERE
MEIEAFRAREFWTVSAVLVTPRGQEFEARLTVLGGKKLDKFDLPTAEAAELAVQAVTSRP
LKVASVEAKPASRNPSAPFMTSTLQQEASRKFGMGAKQCMSAAQRLYEAGHITYMRTDGI
DMAPEAVMAARDEIKRRFGADYVPDSPRMYKNKAKNAQEAHECIRPTDMSASPEKLGLTD
ADQRKLYELIWKRTLASQMAAARLERTTVEIASPDGQVGLRATGQVVLFDGFLKVYEEGR
DDRGEGDEDEGRLPQIMANEAVDKKSITPEQHHTQPPPRYTEATLVKRMEELGIGRPSTY
ASIVSTIQDREYVRKDKNRLIPEDKGRLVTAFLANFFRKYVEYDFTADLEGELDDVSAGE
RNYKEVLARFWRDFSAAVAETADLRIGEVLDKLDDFLAPHLYPPRPDGSDPRICPTCGSG
RLHLKTARGGGAFIGCGNYPECRYTRPISVTGDEDNAISPDGKLLGHDEDGQPITLRSGR
FGPYVQRGEATAEVPKPPRASLPKGWAPDSVDLERARMLLNLPRLVGQHPEDGQPVEAAI
GRYGPYVKHGSTYANLPDVEDVFTIGMNRAVEVLAQKAAGRRGASAPAQPIKELGEHPDG
GVLAVMPGRYGPYVKWGKVNATLPKGVEPEAITLEEALALVAEKAGKAPKKKAPARKAAK
AEGEPKKAAKAEGEAKKAAAKKAAPKASGKKKTAPDTDAA
NT seq 2643 nt   +upstreamnt  +downstreamnt
atggctgtcgtcgtcgtcgaaagcccggccaaggccaagactatcaacaaatacctgggc
tccgactatacggttctggcctcctacgggcatgtccgcgacctgccggccaaggatgga
tcggtcgataccgagcatgagtttgccatgacctgggaggttgcggccgactcgaagaaa
cacgtccgcgcgatcgccgaggcgctgaagaccgatgacacgctgatcctcgccaccgac
cccgaccgcgagggcgaggcgatctcgtggcacctgcaggaggcgctggcctcgtcgctg
aagaagggcaagaccgtcagccgggtgaccttcaacgcgatcaccaaggccgcggtgacc
gaggcgatgaaggcgccgcggcaggtcgatacggcgctggtcgaggcctatctcgcccgc
cgcgcgctggattatctggtgggcttcacgctgtccccggtgctctggcgcaagctgccg
ggggcgaaatcggcgggccgggtgcagtcggtctgcctgcggctgatcgtcgagcgcgag
atggagatcgaggccttccgcgcccgcgagttctggaccgtctcggccgtgctcgtcacc
ccgcgcgggcaggagttcgaggcgcgtctgaccgttctgggcggcaagaagctcgacaag
ttcgacctgcccacggccgaggccgcggaactggcggtgcaggccgtgacctcacggccc
ctcaaggtcgcctcggtcgaggccaagcccgccagccgcaacccgtccgcgcccttcatg
acctcgaccctgcagcaggaggccagccgcaagttcggcatgggcgcgaaacagtgcatg
tcggcggcgcaacggctctatgaggccggccacatcacctacatgcggacggacggcatc
gacatggcgcccgaggccgtcatggccgcgcgcgacgagatcaagcggcggttcggggcg
gactatgtccccgacagcccccgcatgtacaagaacaaggccaagaacgcgcaggaagcc
cacgagtgcatccggcccaccgacatgtcggcctcgcccgagaagctgggcctgaccgac
gccgaccagcgcaagctttacgaactgatctggaagcggacgctggccagccagatggcg
gccgcccggctggagcggaccacggtcgagatcgcaagcccggacgggcaggtggggctg
cgcgcgacggggcaggtcgtgctcttcgacggcttcctcaaggtctatgaggaaggccgc
gacgaccgcggcgagggcgacgaggacgagggccgcctgccgcagatcatggcaaacgag
gcggtggacaagaagtccatcacgcccgagcagcaccacacccagccgccgccgcgctat
accgaggccactctggtcaagcggatggaggaacttggcatcggccggccttcgacctat
gccagcatcgtctcgacgatccaggaccgggagtatgtgcggaaggacaagaaccggctg
attcccgaggacaaggggcggctggtgacagccttccttgcgaacttcttccgcaaatat
gtcgaatacgatttcaccgccgatctggaaggcgagcttgacgacgtctcggccggcgag
cggaactacaaggaagtgctggcgcggttctggcgcgatttctcggcggcggtggcggaa
acggccgatctgcgtatcggcgaggtgctcgacaagctcgacgatttcctcgcgccccat
ctctacccgccgcggcccgacgggtccgatccccggatctgcccgacctgcggctcgggg
cgtctgcatctgaagacggcgcggggcggcggggccttcatcggctgcgggaactacccg
gaatgtcgctacacgcggccgatctcggtcacgggcgatgaggacaacgcgatctcgccc
gatggcaagctccttggtcatgacgaggatggccagccgatcacgctgcgctcgggccgg
ttcggtccttacgtgcagaggggcgaggcgacggccgaggtgccgaagccgccgagggcc
agcctgcccaagggctgggcgccggactcggtcgatctcgagcgggcgcggatgctgctg
aacctgcctcggctggtcgggcagcaccccgaggacggtcagccggtcgaggctgcgatc
ggccgctacggaccttacgtcaagcacggctcgacctatgcgaatctgcccgatgtcgag
gacgtcttcaccatcggcatgaaccgcgccgtcgaggttctggcgcagaaggccgccggc
cggcgcggcgcctcggctccggcgcagccgatcaaggagttgggcgagcatcccgacggc
ggagttctggccgtgatgccggggcgttacgggccgtacgtcaagtggggcaaggtgaac
gcgaccctgccgaagggggtcgagcccgaggcgatcacccttgaggaggctcttgcgctg
gtggccgagaaggcgggcaaggcgccgaagaagaaggcacccgcccggaaggccgccaag
gccgagggagagccgaagaaggccgccaaggccgagggcgaggcgaagaaggccgcggcc
aagaaggcggccccgaaggcctctgggaagaaaaagacggcgccggacaccgacgccgcc
tga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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