KEGG   Rhodovulum sulfidophilum: NHU_00306
Entry
NHU_00306         CDS       T04143                                 
Name
(GenBank) chaperonin GroL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
rsu  Rhodovulum sulfidophilum
Pathway
rsu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rsu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NHU_00306
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsu03019]
    NHU_00306
   03110 Chaperones and folding catalysts [BR:rsu03110]
    NHU_00306
   03029 Mitochondrial biogenesis [BR:rsu03029]
    NHU_00306
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rsu04147]
    NHU_00306
Enzymes [BR:rsu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     NHU_00306
Messenger RNA biogenesis [BR:rsu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     NHU_00306
Chaperones and folding catalysts [BR:rsu03110]
 Heat shock proteins
  HSP60 / Chaperonin
   NHU_00306
Mitochondrial biogenesis [BR:rsu03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    NHU_00306
Exosome [BR:rsu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   NHU_00306
  Exosomal proteins of other body fluids (saliva and urine)
   NHU_00306
  Exosomal proteins of breast cancer cells
   NHU_00306
  Exosomal proteins of colorectal cancer cells
   NHU_00306
  Exosomal proteins of bladder cancer cells
   NHU_00306
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: BAQ67477
UniProt: A0A0D6AX74
Position
complement(296002..297654)
AA seq 550 aa
MAAKDVKFDTDARNRMLKGVNILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELEEKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKEGTKAVAAGMNPMDLKRGI
DMATAKVVEAIKAAARPVNDSDEVAQVGTISANGEANIGRFIADAMQKVGNDGVITVEEN
KGMETEVEVVEGMQFDRGYLSPYFVTNPDKMVAELEDCLILLHEKKLSSLQPMVPLLESV
IQSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQV
ISEDLGMKLENVTMDMLGTAKKVTITKDETTIVDGHGDKAEIEARVAQIRQNIEETSSDY
DREKLQERVAKLAGGVAVIRVGGLTEVEVKERKDRVDDALNATRAAVQEGVIVGGGVALV
QGAKVLEGLTGENSDQNAGIAIVRRSLESPLRQIAENAGVDGAVVAGKIRESDDTHFGFN
AQTEEYGDMFKFGVIDPAKVTRTALEDAASIAGLLITTEAMIADKPEPKGQAAGGGMPDM
GGMGGMGGMM
NT seq 1653 nt   +upstreamnt  +downstreamnt
atggctgccaaggacgtcaagttcgataccgatgcgcgcaaccgcatgctgaaaggcgtg
aacatcctcgccgatgcggtcaaggtcaccctgggcccgaaaggccgcaacgtggtgatc
gagaaatccttcggggcgccccggatcaccaaggacggcgtgaccgtcgccaaggaaatc
gaactggaagaaaagttcgagaacatgggcgcgcagatggtgaaggaagtcgcttcccgc
accaatgacgaggccggcgacggcaccaccaccgcgaccgtgctggctcaggccatcgtc
aaggaaggcaccaaggccgtggctgcgggcatgaacccgatggatctgaagcgcggcatc
gacatggccaccgccaaggtcgtcgaggcgatcaaggccgccgcccgtccggtcaacgat
tccgacgaagtcgcccaggtcggcaccatctcggccaacggcgaagcgaatatcggccgc
ttcatcgccgacgcgatgcagaaggtcggcaatgacggcgtgatcaccgtcgaagaaaac
aagggcatggaaaccgaagtcgaagtcgtcgaagggatgcagttcgaccgcggctacctg
tcgccctacttcgtgaccaaccccgacaagatggtcgccgagctggaagactgcctgatc
ctgcttcacgagaagaaactctcgtcgctgcagccgatggttccgctgctggaatcggtg
atccagtcgcaaaagccgctgctgatcattgccgaggacgtggaaggcgaagcgctggcg
accctcgtggtcaacaagctgcgcggcggcctgaagatcgcggccgtgaaagcgccgggc
ttcggcgatcgccgcaaggccatgctgcaggacatcgcgatcctgaccggcggccaggtg
atctcggaagatctcggcatgaagctcgagaacgtcacgatggacatgcttggcaccgcc
aagaaggtcaccatcaccaaggacgagaccaccatcgtcgacggccatggcgacaaggcc
gagatcgaagcccgcgtggcccagatccgtcagaacatcgaggaaacctcctcggactat
gaccgcgagaagctgcaggaacgtgttgccaagctggcaggcggcgttgccgtcatccgc
gtcggcggcctgaccgaagtcgaagtgaaagagcgcaaggaccgcgtcgacgacgccctg
aacgccacccgcgctgcggtgcaggaaggcgtgatcgtcggcggcggcgtggccctggtg
caaggcgccaaggtgcttgaaggcctgaccggcgaaaacagcgaccagaatgcaggtatc
gccatcgtgcgccgctcgctggaatccccgctgcgccagatcgccgagaacgccggtgtc
gacggtgccgtcgttgcgggcaagatccgcgaaagcgacgacacccatttcggcttcaac
gcccagaccgaagaatatggcgacatgttcaagttcggcgtgatcgacccggccaaggtg
acccggaccgctctggaagatgcggcctcgatcgccggcctgctgatcaccaccgaggcg
atgatcgccgacaagcccgagccgaagggccaggccgccggtggcggcatgcccgacatg
ggcggcatgggcggcatgggcggcatgatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (44)   

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