KEGG   Rhodovulum sulfidophilum: NHU_03602
Entry
NHU_03602         CDS       T04143                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rsu  Rhodovulum sulfidophilum
Pathway
rsu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    NHU_03602
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsu03400]
    NHU_03602
Enzymes [BR:rsu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     NHU_03602
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     NHU_03602
DNA repair and recombination proteins [BR:rsu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     NHU_03602
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS
Other DBs
NCBI-ProteinID: BAQ70734
UniProt: A0A0D6B7N4
Position
3728293..3729144
AA seq 283 aa
MPELPEVETVRRGLTPAMEGRRIVETRVNRPDLRWPLPERMAERLTGAQVLRLGRRSKYI
LVDLSTGETLILHLGMSGRVLISGVALGQFVHPHPTPQKHDHVVIELEGGARVTFNDPRR
FGAMDLAPTEAVADHRMLAGLGPEPLGNGFDEAYLAGRLKGRQTPIKAALLDQHVVAGLG
NIYVCEALHRAGISPLRKAGRIAAARIATLVPAIRTVLSEAIEAGGSSLRDYRQADGELG
YFQHNFRAYGREGAPCPSPGCTGRIHRVVQSGRSTFYCPQCQR
NT seq 852 nt   +upstreamnt  +downstreamnt
atgccggaattgccagaggtagagacagtgcgtcgcgggctgacgcctgcgatggaaggc
cgcaggatcgtcgagacccgggtgaatcgccccgatctgcgctggcccctgcccgagcgg
atggccgagcggctgaccggcgcccaagtgctgcggctggggcggcggtcgaaatacatt
ctcgtcgatctttcgaccggcgagaccctgatcctgcatcttggcatgtccgggcgagtg
ctgatctctggcgtggcgctggggcagttcgtgcatccgcatcccacgccgcagaagcat
gaccatgtggtgatcgagctcgagggcggcgcacgcgtcaccttcaacgacccgcgtcgt
ttcggcgcgatggacctggccccgaccgaggcggtggccgaccaccggatgctggccggg
ctcggccccgagccgctgggcaacggcttcgacgaagcatatcttgcagggcggctgaag
ggacggcagaccccgatcaaggccgctttgctcgaccagcatgtggtcgccgggctcggc
aatatctatgtctgcgaggcgctgcaccgggccggcatctcccccctacgcaaggcgggc
cggattgccgcagcccgcatcgccaccctggttccggcgatccgcacggtcctttcggag
gcgatcgaggccggcggctcgagcctcagggactaccgccaggccgatggcgaacttggc
tacttccagcacaatttccgcgcctatggccgggagggcgcgccctgcccctctcccgga
tgcaccggtcgcatccaccgggtcgtacagtccggccgatcgactttctactgtccgcaa
tgccaaagatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (52)   

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