KEGG   Ralstonia solanacearum UY031: RSUY_04880
Entry
RSUY_04880        CDS       T06155                                 
Symbol
sigE_1
Name
(GenBank) ECF RNA polymerase sigma factor SigE
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
rsy  Ralstonia solanacearum UY031
Brite
KEGG Orthology (KO) [BR:rsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rsy03021]
    RSUY_04880 (sigE_1)
Transcription machinery [BR:rsy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     RSUY_04880 (sigE_1)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 Sigma70_ECF HTH_23 DUF134
Other DBs
NCBI-ProteinID: ALF86873
UniProt: A0A072SZ82
Position
547493..548026
AA seq 177 aa
MSDLAGRLIALTPRLRRHARGLVGDAARADDLVQDTLERAWRYRWRFQLRPRLGATGEAD
GLFAWLLTIMHRLHLNAVRRPDRLEMTDAPPEIPVNDDPGLRRDLLRALASLPDDQRAVL
LLVGLEQLAYREAAAVLGVPLGTVMSRLSRARERMRVALDGAPAASGDSGTTLHRVK
NT seq 534 nt   +upstreamnt  +downstreamnt
atgtccgaccttgccggccgcctgatcgcgctgacgccgaggctgcggcgccacgcgcgc
ggcctggtgggcgatgccgcccgcgctgacgatctcgtgcaggacacgctggaacgcgcc
tggcgttatcgctggcgcttccagctgcgtccgaggctcggtgccacgggcgaggccgac
ggactgttcgcgtggctgttgaccatcatgcaccgcctgcacctgaacgccgtgcgccgg
ccggaccggctggagatgaccgatgcaccgcccgagattcccgtcaacgatgacccgggg
ctgcgccgcgacctgctgcgtgcgctggcgtcgttgcccgacgaccagcgcgcggtgctg
ctgctggtcgggctggagcagcttgcctatcgcgaggccgccgccgtgctgggtgtgccg
ctgggcacggtgatgtcgcggctgtcgcgggcgcgcgaacgcatgcgcgtggcgctcgat
ggcgcgcccgccgcatccggcgacagtggcacgacgttgcaccgcgtgaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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