KEGG   Raphanus sativus (radish): 108805341
Entry
108805341         CDS       T06014                                 
Name
(RefSeq) AMSH-like ubiquitin thioesterase 2 isoform X1
  KO
K11866  STAM-binding protein [EC:3.4.19.12]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108805341
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rsz01002]
    108805341
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108805341
   04121 Ubiquitin system [BR:rsz04121]
    108805341
Enzymes [BR:rsz01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     108805341
Peptidases and inhibitors [BR:rsz01002]
 Metallo peptidases
  Family M67
   108805341
Membrane trafficking [BR:rsz04131]
 Endosome - Lysosome transport
  Others
   Others
    108805341
Ubiquitin system [BR:rsz04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    108805341
SSDB
Motif
Pfam: JAB Prok-JAB
Other DBs
NCBI-GeneID: 108805341
NCBI-ProteinID: XP_018432898
UniProt: A0A6J0JBG2 A0A6J0JB82
Position
1:complement(5103758..5105390)
AA seq 224 aa
MVTVSFPSPSLSFVESGTTCKSPQVSRVLFSGPDELHGESSQPKKILRDVHISERLMEDF
TELARENTEKDLETCGTLAAFLERGVFYVTTLIIPKQESTANSCQAMNEVDVFSIQNERD
LYPVGWIHTHPSQGCFMSSVDLHTHYSYQVMVPEAFAIVVAPTDSSRSHGIFKLTDPGGM
EILRDCSETGFHPHKEPEDGNPVYEHCSNVYKNSNLRFEIFDLR
NT seq 675 nt   +upstreamnt  +downstreamnt
atggtaacggtgtcgtttccatctccctcgctctctttcgtagagagcgggacgacgtgt
aaatcgcctcaagtatctcgggttctgttctctggtcctgatgagcttcacggagaatcg
tctcaacccaagaagatactcagagatgttcatatatcagagaggttgatggaggatttc
actgagcttgcgagagagaacactgagaaggacctcgagacttgtggaactctcgctgcc
ttcctcgaaaggggagttttttatgtgaccactttgataatacctaagcaagaatcaact
gctaattcttgtcaagcaatgaatgaagtggatgtgttttccatacaaaacgaaagagat
ctttatcccgttggatggattcatactcatccttctcagggttgtttcatgtcgtcagtt
gatctgcatacccattactcgtatcaggtaatggtgccagaggcttttgcaatcgtcgtg
gctccaaccgatagctccagaagtcatgggatatttaagctaacggacccgggaggaatg
gagatactgagagactgctcggagacaggattccacccacacaaagaaccagaagatgga
aacccggtttatgagcattgctcaaacgtctacaagaactccaaccttaggttcgagatt
ttcgatctgcgctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system