KEGG   Raphanus sativus (radish): 108807010
Entry
108807010         CDS       T06014                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz00040  Pentose and glucuronate interconversions
rsz01100  Metabolic pathways
Module
rsz_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    108807010
Enzymes [BR:rsz01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     108807010
SSDB
Motif
Pfam: Glyco_hydro_28 LytB_SH3
Other DBs
NCBI-GeneID: 108807010
NCBI-ProteinID: XP_018434747
UniProt: A0A6J0JGI9
Position
1:419258..420977
AA seq 265 aa
MYLLKKNADSFGLLRRTSITFNGANDVVISGVKSMNSQMSHMTLKGCTNVAVRNIKLVAP
GNSPNTDGFGVQSSTGITLTGSTVQTGDDCVSIGPGTRNFLISKLNCGPGHGVSIGSLAK
TLNEDGVENVTLSNSVFTGTQNGVRIKSWARASTGFVNKVFFQNLIMKNVQNPIIIDQNY
CPTHQGCPTEHSGVKISQVTYRNIQGTSATQQAMNLACSKTNPCTGITLQDIKLTYNKGT
PATSYCFNARGTNLGVIQPTSCLNR
NT seq 798 nt   +upstreamnt  +downstreamnt
atgtaccttttgaagaaaaacgctgattcctttggacttttgagacgcacgtccataacg
ttcaacggggcaaacgacgtggtcataagtggagtgaaatcgatgaacagtcagatgtcc
catatgaccctcaagggttgcaccaatgtggctgtccgtaacatcaagctagtggctccc
ggaaacagcccaaacaccgacggttttggcgttcaatcctccacaggaatcacactcact
ggaagcacagttcagaccggagacgattgtgtttctatcggccctggcacccgcaacttc
ctcatctccaaacttaactgtggcccaggtcacggggttagtattgggagcttggcaaag
acattgaacgaagatggagtagagaacgtgacactatcgaattcagtattcaccggaaca
caaaacggcgtgaggatcaagtcgtgggcgagggcgagtactggattcgttaataaagtc
ttcttccaaaacctaatcatgaagaacgtccaaaaccctatcataatcgaccaaaactat
tgtcctacccaccaaggttgccctaccgagcattcaggggtgaagattagccaagtgacg
tataggaacatacaaggaacgtccgcgacacagcaagcgatgaatctggcatgcagcaag
accaatccatgcacaggaatcacattacaagatattaagcttacttacaacaaaggaact
cctgctacttcctactgtttcaatgctagagggactaatctcggtgttattcaacctacg
agttgtctcaaccgataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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