KEGG   Raphanus sativus (radish): 108814489
Entry
108814489         CDS       T06014                                 
Name
(RefSeq) ubiquitin receptor RAD23d
  KO
K10839  UV excision repair protein RAD23
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03420  Nucleotide excision repair
rsz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108814489
  09124 Replication and repair
   03420 Nucleotide excision repair
    108814489
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:rsz03051]
    108814489
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108814489
Proteasome [BR:rsz03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    108814489
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      108814489
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD TECR_N Dsc3_N UBA_3 Ubiquitin_5 Ubiquitin_4
Other DBs
NCBI-GeneID: 108814489
NCBI-ProteinID: XP_018442578
UniProt: A0A6J0K4J7
Position
7:complement(20874008..20876695)
AA seq 384 aa
MKVFVKTLKGTNFEIEVNPAETISDTKKRIETLHGAQYPAAQQMLIHQGKVLKDETTLEE
NNVVDNSFIVIMLSKAKVSSSGASTASAPAPAPSATQAQPAQTVATPQVATPTASVPEPT
SGAATVAAPTAAAASTQTDVYGQAASNLVAGNNLESTVQQILDMGGGSWDRDTVIRALRA
AFNNPERAVEYLYSGIPAQAEIPPAPQAPASGGQAANPLAQTQQEAAPVPATGGPNANPL
NLFPQGMPAADAGAGAGNLDFLRNSQQFQALRTMVQANPQILQPMLQELGKQNPQLVRLI
QEHQADFLRLINEPVEGEENVMEQLEAAMPQAVTVTPEEREAIERLEAMGFDRAMVLEVF
FACNKNEELAANYLLDHMHEFEEQ
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgaaggttttcgtgaagactctgaaagggacaaacttcgagatcgaagtgaatccggcg
gagacgatctctgatactaaaaaacgtatagaaacgcttcatggtgctcaatacccagct
gctcagcagatgctgattcaccaaggaaaagttctcaaggatgagactacattggaagag
aacaacgttgttgacaacagtttcattgttatcatgttgtccaaggccaaggtttcttca
agcggggcatcaactgcatctgcgcctgcacctgcacctagtgctactcaggctcaacct
gcacagacagtagctacacctcaggttgctactccaactgcctcagttccagagcctaca
agtggagctgcaaccgttgcagcacctactgcagctgctgcttcgactcaaactgatgtt
tatggacaagcagcctcaaaccttgttgctggaaacaacctagagtccactgttcagcaa
attcttgacatgggtggaggaagttgggaccgtgacactgttatccgtgccctgagagcc
gcctttaacaaccctgaaagagctgtcgaatatctgtactcaggaatccctgcacaagct
gaaatcccgccagcccctcaagccccagctagtggtggacaggcagcaaaccctctagca
cagacccaacaagaggctgctccagtgcctgcaactggtggtccaaacgctaatccgtta
aacctctttccccagggcatgcccgctgcagatgctggtgccggagctggtaatcttgat
ttcctgcgtaacagtcaacagttccaagccttgagaactatggtacaagcaaacccgcaa
attctacagcctatgctacaagagctcggtaaacaaaacccgcagcttgtacgacttatc
caagagcaccaggcggacttcctacgcttgataaatgaacctgtcgagggagaagagaat
gtcatggaacagttggaagcagcaatgccacaagctgtcaccgtcacacctgaagagcgt
gaagccattgaacggcttgaagcgatggggtttgatcgtgcaatggtcttagaggtgttc
tttgcgtgtaacaagaacgaagaacttgcagctaactaccttctagatcacatgcacgag
tttgaggaacaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system