KEGG   Raphanus sativus (radish): 108816631
Entry
108816631         CDS       T06014                                 
Name
(RefSeq) proline--tRNA ligase, cytoplasmic-like
  KO
K01881  prolyl-tRNA synthetase [EC:6.1.1.15]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    108816631
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rsz01007]
    108816631
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rsz03016]
    108816631
Enzymes [BR:rsz01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.15  proline---tRNA ligase
     108816631
Amino acid related enzymes [BR:rsz01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   108816631
Transfer RNA biogenesis [BR:rsz03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    108816631
 Prokaryotic type
    108816631
SSDB
Motif
Pfam: ProRS-C_1 tRNA-synt_2b HGTP_anticodon Retrotrans_gag Retrotran_gag_2
Other DBs
NCBI-GeneID: 108816631
NCBI-ProteinID: XP_018444696
UniProt: A0A6J0KB70
Position
7:15495368..15498233
AA seq 624 aa
MKKNSARVHELKDDLRSCRQRKGMTVCDYYNKLKTIWEDLETHQHKPKSCRCGGCNCEDV
ETSRDEEKLHQFLLGLDASIYTNVKDEILDTDPLPSLEQAYSMVSQEEKNRVSSYQKVSG
ETVVDVISSGNAEEDSIDTSLGVTVKKYEDFGQWYSQVCRCGEMMAYYDISGCYILRPNA
MKIWNIMRTYFDAVLEKAKVGESYFPLFVSTSVLEKEKDHVEGFAPEVAWVTKAGKSDLN
VPIAIRPTSETVIYPYFSKWIKSHRDLPLKLNQWNNVVRWEFSKPTPFIRSREFLWQEGH
TAHATKEEADKEVLEVLDHYCHLYEEYLAVPVVKGMKSENEKFAGALYTTSVEAFIPETG
RGIQGATSHCLGKKFAKMFDITFTNKEGKNRRVWQNSWAYSTRTIGVMIMTHGDDKGLVN
PPKVAPIQVIVVPVPFKDADTKEISKACTDVKDALRKDGIRAEEDLSDNYSPKCKYTQWE
MRGVPLRIEIGPRDLAKDQVRTVRRDTGVKADVPRVGLVEHVKELLEKIQHNMFDVAKQK
RDAACVIVKTWDEFVEALGQKKLILAPWCDEKEVEMDVKRRTKDEIGAAKTLCSPFDQPE
IPEGTLCFASGKPAKKWTYWGKSY
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgaagaagaacagtgctcgagttcatgaactcaaggacgacttaagatcatgcaggcag
aggaaaggcatgactgtttgcgattactacaacaaactcaaaactatttgggaagatctc
gagactcaccaacacaaacctaagtcgtgtcgttgcggtggatgcaactgcgaagatgtg
gagacatctagagacgaagagaaattacatcagttcctcttgggattagatgcttcaata
tataccaatgttaaagatgagatccttgacacggatccattaccaagcctggaacaagct
tattcgatggtttctcaagaagaaaagaatagggtttcgagttatcaaaaagtaagtgga
gaaactgtcgttgatgtaataagttctggtaacgcagaggaagactctattgacaccagt
cttggcgttacggtcaagaaatatgaagatttcggacaatggtattctcaggtttgcagg
tgtggtgagatgatggcatactatgacataagtggatgttacattctaaggccaaatgct
atgaagatttggaatattatgcgaacctactttgatgctgtattggagaaggcaaaagtg
ggtgagagttatttccctttgtttgtatcaactagtgttcttgagaaggagaaggatcac
gtagaagggtttgctccagaggttgcatgggttacaaaggctggtaaatctgatttaaat
gttccaattgcaattcgtccaacgagtgagactgtgatatatccttacttcagtaagtgg
ataaagagtcaccgtgacttgcctttgaagctaaaccagtggaacaatgtagttagatgg
gagtttagcaaacctactccattcatcaggagccgagagttcctttggcaagaaggacac
actgctcacgccacaaaagaagaggcagataaagaggttcttgaggttttggaccattac
tgtcacctttatgaagaatatctcgcggtcccagttgtaaaaggtatgaagagtgagaat
gaaaagtttgcaggtgcactttacaccacaagcgtagaggctttcataccagaaactggt
cgtggtatacaaggtgcaacatcacattgcttagggaaaaagtttgcaaagatgtttgac
atcacattcacgaataaagaaggtaaaaatagaagggtgtggcagaattcttgggcttat
agtaccagaacgattggagtgatgataatgactcatggagatgacaaaggattggtgaat
cctcctaaagttgcaccaattcaagtcattgtggtcccagtgccattcaaagatgcagat
actaaggagatatctaaagcttgtactgatgtgaaagatgcattgcgcaaagatggtata
cgtgctgaagaagatttatctgataactattctcctaaatgcaagtatacacagtgggaa
atgagaggtgttccgcttagaattgaaataggacctagagatttagccaaagatcaggtc
agaactgtgagaagagatactggagttaaggctgatgttccaagagtaggtttggttgaa
catgttaaggagttgcttgaaaagattcagcacaacatgtttgatgtagctaagcagaag
cgagatgctgcctgtgtaattgtaaagacttgggatgagtttgttgaagcacttggtcaa
aagaaactcattttagctccttggtgcgacgagaaggaggttgaaatggacgttaagaga
aggaccaaagatgaaattggagcagctaagactctttgttctccctttgatcagcctgaa
attccagaagggacactatgttttgcttcaggaaagcctgcaaagaagtggacttattgg
ggcaagagttactaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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