KEGG   Raphanus sativus (radish): 108820096
Entry
108820096         CDS       T06014                                 
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic-like
  KO
K01874  methionyl-tRNA synthetase [EC:6.1.1.10]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz00450  Selenocompound metabolism
rsz00970  Aminoacyl-tRNA biosynthesis
rsz01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    108820096
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    108820096
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rsz01007]
    108820096
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rsz03016]
    108820096
Enzymes [BR:rsz01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.10  methionine---tRNA ligase
     108820096
Amino acid related enzymes [BR:rsz01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   108820096
Transfer RNA biogenesis [BR:rsz03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    108820096
 Prokaryotic type
   Other AARSs
    108820096
SSDB
Motif
Pfam: tRNA-synt_1g tRNA_bind Anticodon_3 tRNA-synt_1 Anticodon_1 tRNA-synt_1e
Other DBs
NCBI-GeneID: 108820096
NCBI-ProteinID: XP_056847582
UniProt: A0A9W3C7Z1
Position
8:complement(21146724..21151500)
AA seq 797 aa
MEDGESSPKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYI
CGTDEYGTATETKALEENCSPKEICDKYHAIHKQVYEWFDISFDKFGRTSTPQQTHVCQA
IFNKLFDNNFLSENTMQQLYCDTCNKFLADRLVEGSCPFKECNYDSARGDQCEKCGKLLN
PTELKDPRCKVCQTTPRIRDTDHLFIELPLLKDKLEEYINETSVTGSWSQNAIQTTKAWL
KEGLRQRCITRDLKWGVPVPHEKYKEKVFYVWFDAPIGYVSITSCYTSEWEKWWKNPENV
ELYQFMGKDNVPFHTVMFPSTQLGTGENWTLMKTISVTEYLNYEKGKFSKSKGVGVFGDD
VKNTNIPVEVWRYYLLTNRPEVSDTLFTWKDLQAKLTGELLNNLGNFVNRVLTFIAKPEP
AGYGSVIPDAPGAESHPLTQSLAENVGKFVEQYVEAMEKVKLKQGLKIAMSISNEGNAYL
QETKFWKLYKEDKPSCAIVIRTAAGLVHLLAQFLEPFMPSFSREVFKQLNLPLQFSLTDE
RGEVSLASRPWEILPRNHKIGTPQPLFKELTDEEVQQYKEKFEGSQSDRRGRDAEAANMA
ADQLKKTNLSDAKKQKASKGAATSKTQPAADREITMARLDIRVGKILKAEKHPNADSLYV
EEIDVGGGEIRTIVSGLVKYIPLEEMQNRLVCVLCNLKPAKMRDVMSQGMVLAASSRDGS
KVELVEPPESAEIGERVRFQGFEGEPDTVLNPKKKVWETLVVDLHTDENLVACYKDLPFS
TDAGVCKVSSITNGTIR
NT seq 2394 nt   +upstreamnt  +downstreamnt
atggaagacggagaaagctcccccaagctaccgattcctgggaagagaaacatactaatc
accagtgccttgccttatgtcaacaacgtccctcatctcggaaacatcatcggatgtgtt
ctgagtgctgatgtgtatgcaagatactgtcgtctacgtgggtacaatgcgatatatata
tgtgggactgatgaatacggaactgctactgagaccaaagctctggaggagaactgctcc
cctaaggaaatctgtgacaagtaccatgccattcacaaacaagtttatgagtggtttgat
ataagttttgacaagtttgggcgtacttcaactcctcaacaaactcatgtctgccaagct
atttttaataagttgtttgataacaactttctttctgagaacaccatgcagcagctttac
tgcgatacatgcaacaagttcttagctgaccgcctcgttgagggttcttgcccgtttaaa
gaatgtaattatgattccgctcgtggagatcagtgtgaaaaatgtggaaagctcctcaat
cctaccgaactcaaagatcccaggtgcaaggtctgtcaaactacaccccgaattcgtgac
acagaccacctgtttattgagcttccgctgctgaaagataagttggaagagtatattaac
gagacatctgttacgggatcttggagtcaaaacgctattcaaacgacgaaagcatggctt
aaggaagggcttagacagagatgtattacgagggatctaaagtggggagttcctgttcca
catgagaaatataaggaaaaagtcttctacgtgtggtttgatgctcctattgggtacgtc
tcgataacgtcgtgctacacatctgaatgggagaagtggtggaagaatcctgagaatgtg
gagctttatcagtttatggggaaagacaacgtgccatttcacactgtgatgtttccatct
acgcagcttggaactggggagaattggacactgatgaagacaatcagtgtgactgaatat
ttaaattacgaaaaggggaagttctccaagagtaaaggtgttggagtgtttggtgatgat
gtgaaaaatacaaatatccccgtcgaagtatggagatattacttgctgacgaacaggcct
gaggtgtctgacacactatttacatggaaagatttgcaagcaaaactgactggcgagtta
ctgaataacttaggcaactttgttaaccgagttctgacttttatagcaaagcctgaacct
gcaggttatgggtctgtcattcctgatgctcctggtgctgaatctcatcctttaacccaa
tctctggctgaaaatgttggaaaatttgtggagcagtatgttgaagccatggaaaaggtt
aagctcaagcaagggctgaaaatcgctatgagcatctcgaatgaagggaacgcatacttg
caggaaaccaaattttggaaactttacaaggaagataaaccttcttgtgcaattgttata
agaactgctgctggtttagtacaccttcttgcacaatttttagaacctttcatgccatct
ttctcccgtgaggtatttaaacagctgaatttgcctctacaattttcactcactgacgag
agaggagaggtttcattagcaagtagaccttgggagattctgcctcgcaatcacaagata
ggcacccctcaaccattgttcaaggaattgacagatgaagaggtgcaacagtacaaagaa
aagtttgagggaagtcagtctgatagacgtggtagggatgcagaagccgcaaatatggcg
gcggatcaacttaaaaaaacaaatctttcagatgctaaaaagcaaaaggcatcaaaaggt
gcagcaacatccaaaactcaaccggctgctgatcgtgaaattactatggcgagacttgat
attcgagtcggcaaaattctgaaggctgagaaacatcctaacgcagattcactgtatgtg
gaagaaattgatgttggaggaggggaaattaggactattgttagtggattggtcaagtat
atacctcttgaggagatgcagaaccgtttggtttgtgttctttgcaacttgaagccggcg
aaaatgagggatgttatgtcacaaggaatggttcttgccgcttccagtagggacggcagc
aaggtggagttagtcgagccccctgagtcggctgagattggagagcgagttagatttcaa
gggtttgaaggcgagccagacactgtcttaaacccgaagaagaaagtatgggagacgctt
gtggtggatctgcacacagatgagaatctagttgcttgctacaaagatttgcccttcagt
acagatgcaggtgtatgcaaggtttcctccatcaccaatggcacgatccggtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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