KEGG   Raphanus sativus (radish): 108822276
Entry
108822276         CDS       T06014                                 
Name
(RefSeq) uncharacterized protein LOC108822276 isoform X1
  KO
K12472  epidermal growth factor receptor substrate 15
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108822276
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108822276
Membrane trafficking [BR:rsz04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    108822276
SSDB
Motif
Pfam: EF-hand_4 EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_5 Syntaxin Trypan_PARP HR1 MCCD1 COG3_N
Other DBs
NCBI-GeneID: 108822276
NCBI-ProteinID: XP_018450816
UniProt: A0A6J0KTH9
Position
8:4076819..4083180
AA seq 1191 aa
MAAPRPTGSQDLFDAYFRRADLDGDGRISGAEAVAFFQGSNLPKNVLAQVWSCADAKKAG
YLGRAEFYNALKLVTVAQSRRELTPEIVKAAIYGPASANIPAPKINLAATPSPQPRGVVP
ATQAQGGASLPSVPPGMRGPQMGGTVSSSNQQVGTGQQNQFMGAPPSQPQQNFQSQVMPS
GGTTAPRTANQPMPSDWLSGRSVGPSGQVNSQIPSNQSGYGLTAPNSIANNTPKPHMTPA
VISSTTARPQESAPVHKPQDSSAPSGARALDAPSNQLVAKDPKELAASGNGFPSDSLFGD
VFTVASSQPKQHPVGTTSTMGISPSSGTTGSTVGVGLAASGQMTQRQSQPQPQPRPQHQP
HHQPQHQPHHQPQHHPRPHPQSQIQHQPHPQSQAPWPRMTPADVQKYAKVFVQVDTDRDG
KITGHQARNLFLSWKLPRDALRQVWDLSDQDNDSMLSLREFCIAVYLMERYREGRPLPPV
FPSTIISSESMFTSPSQSVAPQGNASWGHTHGQVHGASRPPAIPKGKPPRPVPLSPSDGM
VQSTQPKRKMPELEKQLVDQLSKEEQDSLNSKFEEATAIDKKVDDLEKEIADSKQKIEFF
HAKMQELVLYKSRCDNRYNEITERVSGDKRELESLAKKYEEKYKKSGNVGSKLTIEEATF
RDIQEKKMELYQAIVKFEEGKLDDSIVKERTEHIQSGLEELIKQLNERCKQYGVRGKPTS
LVELPFGWQPGIQEGAADWDEDWDKLEEEGFTFVKELTLDVQNVIAPPKEKSSTWKKEVT
VSSNEGEHVSSSDVESKTEKNPSSGEEASEHSDGKTDRNGSLDGSPRTKDTRSENGHDDG
ESTPSAGKTVKEPSYDSHDETDSVSSFNPDNGKDKKHDTDFGFGFGFDDFSIKPIKTGST
LSNDFLPPKLSIFSDSVPSPPANANDGFTAKPSLFADSVPSTPATTTASYPGNKSYFDES
VPSTPAYAGTSYFDESVPSTPAYPGTLFPEKKSFFDDSVPSTPAYPGNLFPEKKSFFDDS
VPSTPAYSTSDFGGKPFASETPRSDNLFPGRSPFMFDSVPSTPAAHDDYSSNSFSRFDSF
NSNNNSNDAFSLSRSDSMRSTSEPDPFASRFDSFNYQRYDSFNAQSYDHNNTSETPKASL
TRFDSIGSTRDSDYSQGFGFDDHDPFGSTGPFKTTTNTAETPRSSDHWNAF
NT seq 3576 nt   +upstreamnt  +downstreamnt
atggcagcgccgaggccgacggggagccaggatctgttcgatgcttatttcaggagagcg
gatttggatggagatggtcgtatcagtggagctgaggccgtcgctttcttccaaggctcc
aatttgcctaaaaacgtccttgctcaggtatggtcctgcgcagatgcaaaaaaggctggt
taccttggtcgagcggagttttataatgctctaaagttggttactgtggcgcaaagtaga
cgggaattaactcctgagatagtcaaggctgcaatttatggtcctgcttctgccaatatc
cctgctcccaaaataaatcttgctgcaacaccctctccacagcctaggggagttgtgcct
gctacacaagctcaggggggtgcgtcactgccttcagttccgcctggtatgagagggcct
caaatgggtggaactgtaagcagtagtaaccaacaagtaggaacgggccagcagaaccaa
tttatgggggcgcctccatctcaaccacagcaaaactttcaaagccaggttatgccatct
ggagggactactgcgcctcgtacggcaaaccaacctatgccatctgattggctcagcggc
agaagtgtcgggccctctgggcaagtgaattctcaaataccttcgaatcaaagtggatat
ggtttgacggcacctaactcaattgccaacaatacaccaaaaccgcatatgacacctgct
gtaataagctctacaacagccagacctcaagaatcagcgccggtgcataagccccaagat
tcatctgctccttcaggtgctcgtgctctagatgctccatccaatcaattggtagccaag
gatccaaaggaactagctgcatcaggaaatggttttccctctgactcacttttcggagat
gtgtttacagttgcttcctcgcagccaaaacaacatcctgtgggaactacgtcgacaatg
ggcatctcaccttcttctggtacaactggctctactgttggtgttgggcttgcagcttct
ggtcagatgacgcagcgtcagtctcagccccaaccccaaccccgaccacagcaccaacca
catcaccaaccccagcatcaaccacatcaccaaccccagcaccacccccgaccccacccc
caatctcaaatccaacaccaaccccacccccagtcccaagccccttggccaagaatgact
ccagctgacgtccagaaatatgcaaaggtatttgtgcaagttgacactgatagggacggc
aagatcactgggcaccaggctcggaatctgttcttaagttggaagctcccgcgagacgct
ttgaggcaggtatgggacttatctgatcaagataatgatagcatgctttccttgagagag
ttctgtattgctgtctatctaatggagcgttatagagagggccgacctcttccccctgta
ttcccaagcactataatatctagtgagagcatgtttacctctcctagtcaatctgtggca
ccacaaggcaatgcatcctggggacatacacatggtcaagttcatggggcctcgagacca
ccagcaattcccaaaggaaagcctccaaggccggtccctctctctcctagtgatggaatg
gtccagtccactcagccaaagcgtaaaatgcctgagttggaaaaacagctggtggatcaa
cttagcaaagaggagcaagattcgctcaactcaaagtttgaagaagccactgctattgat
aaaaaggtggacgaccttgaaaaggaaatagctgattccaagcagaaaattgagttcttc
catgctaaaatgcaggaacttgttttatacaagagtagatgtgacaaccggtacaatgag
atcacggagagagtctcgggtgataaacgtgagcttgaatccctagcaaaaaaatacgag
gagaaatacaagaagtctggcaatgtaggctctaaattgacaattgaagaagcgacattc
cgcgatatacaggagaagaaaatggaattgtaccaggctatagtcaaatttgaagaaggc
aagcttgatgatagtattgttaaggagcgcactgaacacatccaatcgggccttgaggaa
ctgattaaacaattgaatgagcgctgcaaacaatatggagtacgtggcaaacccacttct
ctggtggagcttccctttggttggcaacctggaatccaagaaggtgctgctgattgggat
gaagattgggataagctagaggaagaagggtttaccttcgtcaaggagcttacacttgat
gtccaaaatgtcattgccccaccaaaggaaaaatcatctacttggaagaaagaagttacc
gtctcttcaaatgaaggtgaacacgtttcatcctcagatgttgagtctaaaacagagaaa
aatccaagcagtggagaagaggcatctgaacattcagacggtaaaacagatagaaacgga
tctctggatgggtcacccagaaccaaagatacgcggagtgaaaatggccatgatgatggt
gaatctaccccttctgctggaaaaactgtaaaagaacctagttatgactctcacgatgag
acagattcagtttcaagcttcaaccctgacaacggaaaggacaagaagcatgatactgat
tttggattcgggttcggattcgatgatttcagcattaaacctataaaaacgggttccacc
ctatcaaatgacttcctccctccaaagctatctatattttctgattctgtcccaagtccc
ccggcaaatgccaacgacggtttcactgcaaaaccttccttgtttgctgattccgtcccc
agcaccccggcaacaaccactgcctcttacccaggcaataaatcatacttcgatgagtct
gtcccaagcactcctgcttacgcaggtacatcgtacttcgatgagtctgttccaagcact
cctgcttatcctggaaccttgtttcccgagaagaaatcatttttcgacgactctgttcca
agcactcctgcttatcctggaaacttgttccccgagaagaaatccttcttcgatgactct
gtcccaagcactcctgcttatagcacgtctgattttggtgggaagccgtttgcatcagag
actccacgttcggacaacttgttcccaggaagaagtcccttcatgttcgattctgtccca
agcacacctgctgcacacgatgactactcttccaacagcttctcccgcttcgattcattc
aacagcaataacaacagcaatgacgctttctctctgtcccgctcagactcgatgcgcagc
acaagcgagccagacccattcgcatcaaggtttgattctttcaactatcagagatatgat
tccttcaatgcacaaagctatgaccacaacaacacttcagagacacctaaagcttcgttg
acgagattcgactcaattggaagcacgagagactctgattacagtcaggggtttgggttc
gatgaccatgacccgttcggttctacgggaccattcaaaacaacgacaaatacagctgag
acacctcggagctctgatcactggaatgccttctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (22)   

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