KEGG   Raphanus sativus (radish): 108822856
Entry
108822856         CDS       T06014                                 
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform
  KO
K03456  serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108822856
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rsz01009]
    108822856
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108822856
   03036 Chromosome and associated proteins [BR:rsz03036]
    108822856
Protein phosphatases and associated proteins [BR:rsz01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     108822856
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     108822856
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     108822856
SSDB
Motif
Pfam: HEAT HEAT_2 Vac14_Fab1_bd Htt_N-HEAT_1 PDS5 HEAT_EZ SCD Adaptin_N CLASP_N TAF6_C Cnd1 CEP104-like_TOG Cobl
Other DBs
NCBI-GeneID: 108822856
NCBI-ProteinID: XP_018451545
UniProt: A0A6J0KUE9
Position
8:complement(5028750..5032273)
AA seq 588 aa
MAMVDEPLYPIALLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENSDDD
DEVLLAMAEELGVFIPFVGGIEHAHVLLPPLESLCTVEETSVREKAVDSLCKIGSQMKES
DLVDSFVPLAKRLAAGEWFAARVSACGLFHVAYQGCTDVLKTELRSSYGQLCQDDMPMVR
RAAASNLGKFATTVESTFLNAEIMTMFDGLTKDEQDSVRLLAVEGCAALGKLLEPQECVA
RILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDCTKTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCQLLNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPILGKDSTIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
VPLLASQLGIGFFDDKLGALCMQWMQDKVYSIREAAANNLKRLAEEFGSEWAMQHIVPQV
LDMVNNPHYLHRMMALRAISLMAPVMGSEITCSKFLPVVVEASKDRVPNIKFNVAKLLQS
LIPIVDQSVVDKTIRQCLVDLSEDPDVDVRYFANQALRSIDAAAVAQS
NT seq 1767 nt   +upstreamnt  +downstreamnt
atggccatggtggatgaacccttgtaccccatcgctcttctcatcgacgagctcaaaaac
gatgacatccagctccgtctgaactctatccgccgtttatctacaatcgctcgtgccctc
ggagaggagcgtactaggaaagagctgatcccctttctgagtgagaacagtgacgacgac
gatgaggtcctcctcgccatggctgaggagctgggagttttcatccccttcgtcggtggg
attgagcatgctcatgtgctcctccctcctctcgaatctctctgcaccgtcgaggagaca
tccgtgagagagaaagctgtggactctctttgtaagatcggttctcagatgaaggagagt
gaccttgtcgactcctttgtccctcttgccaagaggcttgcggctggtgagtggtttgcg
gcgagggtttcggcatgtggtttgtttcatgttgcttaccaaggttgtaccgatgtgttg
aagacggagttgcggtctagttatggtcagttgtgccaagatgatatgcctatggtgcgg
agagctgctgcgtctaacctggggaagtttgctacgactgtggagtcgacgtttttgaat
gctgagatcatgactatgttcgatggtcttactaaagatgagcaggattctgttagactt
ttggctgtggaaggctgtgcagctcttggaaagttgttggaacctcaggaatgtgttgca
cgcattttacctgttattgttaatttctctcaggataaatcatggagggtgcgctacatg
gttgctaatcaactatacgaactttgcgaggcagtgggtcctgattgcaccaagacggat
ttggttcctgcatatgtgagattgctacgtgacaatgaggctgaagtgcgaatagcagca
gcgggaaaagtgactaagttctgtcagcttttgaatccagagcttgccatccagcacatc
cttccttgtgtgaaggaattatcatctgattcttctcaacatgtccgctctgctctagct
tcagtaataatgggaatggctcctatccttggcaaggattcaacgattgagcatctgcta
ccaatttttctttcccttttgaaagatgaatttcctgatgtacgcctcaacatcataagc
aagctagaccaagtcaaccaggttattggaattgatctgctatcacagtccttgttgcct
gcgattgttgagcttgctgaggatcggcactggagagtccgacttgctataattgagtat
gttcctctgttggctagccagttaggtatagggttcttcgatgacaagctcggagccctt
tgcatgcaatggatgcaagacaaggtctactctatccgtgaagccgcagcaaacaaccta
aagcgtcttgcagaggagtttggttctgaatgggcaatgcagcacatagttccccaggtg
ttggacatggtcaacaatccgcactacctacataggatgatggctctacgtgcaatctct
ctcatggctcctgtaatgggatcagaaatcacgtgctctaagtttcttcctgtggtggtt
gaggcatccaaagacagagttccaaacatcaagttcaatgttgctaagcttctgcaatcc
ctcatccccatagtcgaccaatcagtggtggacaaaacaatccgtcagtgtttggtggac
ctgagcgaggaccctgatgtcgatgttcgctattttgcaaaccaagcgcttcgttccatt
gatgctgccgcagtggcgcaatcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system