KEGG   Raphanus sativus (radish): 108823416
Entry
108823416         CDS       T06014                                 
Name
(RefSeq) pentatricopeptide repeat-containing protein At5g55840
  KO
K17964  leucine-rich PPR motif-containing protein, mitochondrial
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:rsz03029]
    108823416
Mitochondrial biogenesis [BR:rsz03029]
 Mitochondrial quality control factors
  Mitochondrial respiratory chain complex assembly factors
   Complex-IV assembly factors
    108823416
SSDB
Motif
Pfam: PPR_2 PPR_1 PPR PPR_3 PPR_long MRP-S27 Ank_4
Other DBs
NCBI-GeneID: 108823416
NCBI-ProteinID: XP_056850562
UniProt: A0A9W3CGC6
Position
9:complement(8120499..8125065)
AA seq 1133 aa
MSGFSSLFSHRNGGISLLRHGSSKLGCFSRVSFSSSIPKQSKRDDDYASHDAFGVDMEKS
IYNILTIDRWGSLNHMDYRQARLRPVHGKLALKFLKWVVKQPGLEPDHLLHLFCITTHIL
VRARMYDHARHILKELSRTGDDDKPSFVFGALMTTYRLCNSNPAVFDILIRVYTREGMIK
ESLEVFRLMGLYGFNPSVHTCNAMLGSIVKSDGDDVSVWSFLKEMLKRKICPDVATFNIL
INALCAEGNFKKSCYLMEKMEKSGYPPTIVTYNTVLHWYCKKGRFKAALELIDHMKSKGV
DADVCTYNMIINDLCRNSRSAKGYLLLRKMRKRMVYPNEVTYNTLINGFANEGKVLIARQ
LLDQMLTFGLSPNHVTFNALIDGYISEGNFKEALKMFHMMEAQGLIPTEVSYGVLLDGLC
KHAEFDLARGFYMRMKRSGISVGRITYTGMIDGLCKNGLLDEAVEMLDEMSKDGIDPDIV
TYSALINGFCKVGRFGTVKEIVCRIYRAGLSPNGIIYSTLIYNYCRMGCLKEALRIYEAM
ILEGHTPDHFTFNILVSSLCKAGKVGEAEEFMRRMTSDGILHNAVGFDCLINGYGSSGEA
LKAFSVFDEMTKAGHHPTFFTYGGLLKGLCKGGHLKEAEKFLKSLLHDVPAAVDTVMYNT
LLTAMCESGNLDKAVSLFGEMVQRSILPDGYTYTSLISGLCRKGKTVIAVLFAKEAEARG
NLLPNEVMYTCFVDGMFKAGQWKAAFHFREEMEKLGLTPDAVTTNAMIDGYSRMGKVEKA
SDLLSETEPNLTTYNILLHVYSKRKDIPTTFKLYRSMILNGILPDKLTCHSLILGICESN
ALEIGVKILKAFICRGFEVDRSTFNMLISKCCANGEISKVFDLVNVMNLLGISLDKVTYD
AIVSILNRNHRFQESRMVLHAMSKQGLSPDCTKYISLLNGLCRVGDIKTAFMLKDEMIAH
KICPPNVAESAMVRALAKCGKAEEATLLLRSMLKKKLVPTIASFTTLMHLFCKNGDVTDA
LELRVVVRNCGLKLDLVAYNVLITGLCDKGDMVAAFKLYEEMKQDGFLANATTYKALISG
ILSVDIPFSETDMIMEDLLARGFITSLSSSQDSHKTLTMVMEKLKALQSHKKG
NT seq 3402 nt   +upstreamnt  +downstreamnt
atgtcaggtttctcgagcttattttctcacagaaacggaggaatctctctattgcgtcac
ggttcttcaaaactcggatgtttctctcgagtatcgttttcttccagcatcccaaaacag
tcgaaacgagatgatgattatgcttctcacgacgcatttggagttgatatggagaagagc
atatacaacattcttacaatcgaccgttggggatctctaaaccacatggattatagacag
gctcgtcttagaccagttcacgggaagctagccttgaagtttctcaaatgggtagtcaaa
cagccaggtctggagcctgaccatcttctccacctgttctgcatcactacgcatatactc
gttagagctagaatgtacgaccacgcaaggcacatcttgaaggagctgtctcgaacgggt
gacgacgacaaaccgagctttgtgtttggtgctttgatgaccacgtacaggctatgcaac
tcgaaccctgctgttttcgacatcttgattcgtgtgtatacgagagaaggaatgattaaa
gaatctctggaggtgtttcgtttgatgggtctttacgggttcaacccttctgttcacact
tgtaacgcaatgctgggatccattgtgaagagtgatggggatgatgtgtcagtctggtct
ttcttgaaggaaatgctcaagaggaagatttgtcccgacgtggctaccttcaatatacta
atcaatgcgctctgtgctgaagggaactttaaaaagtcttgttatctcatggaaaagatg
gagaagagtggttatcctccaacgatagttacgtacaacactgtgctacattggtactgt
aaaaagggaagatttaaagctgctttggagcttatagatcacatgaagtccaaaggggtt
gacgcagatgtatgtacatataacatgattatcaacgatttgtgcagaaacagtagaagt
gccaaaggctatttgttgctgaggaaaatgaggaagaggatggtttaccccaacgaagtc
acgtacaatacgctgatcaatgggtttgcaaatgaaggaaaggttctcattgctcgtcag
cttttggatcagatgttaacctttggactttccccgaatcatgttactttcaatgctttg
attgatgggtacattagtgaaggaaactttaaagaggctctgaagatgtttcatatgatg
gaggcacaaggtcttatccctactgaagttagctatggggtacttttagatgggttgtgc
aagcacgcggagtttgatctagcgagggggttttacatgagaatgaagagaagtgggatc
tctgttgggcgaataacatacactggaatgattgatgggttgtgcaagaatgggttattg
gatgaagcggttgagatgcttgatgaaatgagcaaagatggtattgatcctgatatcgtc
acatactcagcacttataaatggattttgcaaggtggggaggtttggaactgttaaggag
atagtctgcagaatttaccgagctggtcttagtccaaacggcatcatatactcaacgctg
atatacaattactgcaggatgggatgtttaaaggaagctttaagaatttatgaagctatg
atccttgaaggccatactccagaccatttcacgttcaatatacttgtctcttcgctatgt
aaagctggtaaagtgggtgaagccgaagagtttatgcgtcgcatgacaagtgatggtatt
cttcataacgcagttggctttgattgccttatcaacggatatggaagctccggtgaagcg
ctaaaagcgttctctgtatttgatgagatgaccaaagcaggtcatcacccaactttcttc
acatacggtggtctactcaagggattatgcaaaggtgggcatctgaaagaggcagagaag
tttctgaaaagcctcctccatgatgttcctgcagctgttgacactgtaatgtacaacacg
ctactcactgcaatgtgtgaatcagggaacttggacaaggctgtctctctgtttggtgag
atggtgcagcgaagcattctgcctgacggttatacatataccagtcttatctctgggttg
tgtaggaagggaaagactgttattgccgtactctttgctaaagaagctgaggctcgaggt
aatctgcttcccaacgaggtgatgtacacatgttttgtggatggtatgttcaaagctggc
cagtggaaagctgcttttcatttccgggaggaaatggagaagcttggccttacccctgat
gctgtcacaacaaacgcaatgattgacggttactcaaggatggggaaagtagagaaggcc
agtgacctgctttctgagacggaacctaatctgactacctacaacatcctattgcatgtt
tattcaaagaggaaagacataccaacgacctttaagctgtatagatcaatgatactgaac
ggcattttacctgacaaactcacatgccattctcttattctcgggatttgtgaatccaac
gcgttggagattggtgttaaaatcttgaaagcgttcatatgccgaggttttgaagttgac
aggagcacgttcaacatgctaatctccaaatgctgtgcaaacggagagatcagcaaggtt
ttcgatctggttaacgtcatgaacttactgggaatctctcttgacaaagttacttatgac
gccattgtaagcatcctcaacagaaaccacagattccaggaatctcgcatggttttgcac
gcaatgtcgaagcaaggcttatctcctgattgtaccaagtatatcagtctgcttaacggt
ctttgtagagtgggtgatataaagactgcgtttatgctgaaggatgagatgatagcgcac
aagatatgtccgcctaacgtagctgagagtgctatggtgagagcgcttgcaaaatgcggc
aaggctgaagaagctacactgcttcttcgttccatgctgaaaaagaagttggttccgact
attgctagtttcactactctgatgcacttgttctgcaagaacggtgacgttacagatgct
ctggaattgagagtcgttgtgagaaactgtggcctgaagctcgatctcgtggcgtacaat
gtattgattactggactttgtgataaaggtgatatggtagctgcgtttaagctctatgaa
gagatgaagcaagatgggttcttagctaatgcgactacttacaaagctctcatcagtggg
attctttccgtagatatcccattctcagagactgatatgatcatggaagatttacttgca
agaggattcataacatccttgagctcgtctcaagattcacacaaaaccttgacaatggtc
atggagaagctgaaggccttgcagagtcacaagaagggataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system