KEGG   Raphanus sativus (radish): 108828494
Entry
108828494         CDS       T06014                                 
Name
(RefSeq) alpha-amylase 3, chloroplastic
  KO
K01176  alpha-amylase [EC:3.2.1.1]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz00500  Starch and sucrose metabolism
rsz01100  Metabolic pathways
rsz01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00500 Starch and sucrose metabolism
    108828494
Enzymes [BR:rsz01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.1  alpha-amylase
     108828494
SSDB
Motif
Pfam: Alpha-amyl_C2 Alpha-amylase Radical_SAM Glyco_hydro_70
Other DBs
NCBI-GeneID: 108828494
NCBI-ProteinID: XP_018457712
UniProt: A0A6J0LCA1
Position
9:complement(2831720..2836389)
AA seq 901 aa
MSTVPIETLLHHSPLRHASLNGATGFFFSPSSLNLRCHFASKKLHSIGRRSIVVSGNSLG
ERRRSVAVRASSSDTAVVETTSRSDDDVIFKQDFPVERIDKAEGKISVRLKQAKENKWEL
SVGCSLPGKWILHWGVSYVGDTGSEWDQPPEDMRPPGSVSIKDYAIETPLGKLSEGDSFH
EVTINLNLESSVAALNFVLKDEETGAWYQHKGRDFKVPLLDDVPDDGNLIGSKKGFGALG
KLSNIVVKPDEPSADVQEKGTSSSGSTKERKGLEEFYEEMPISKHVAGDNSVSVTAKKCP
ETSKNIVSIETDLPGDVTVHWGVCKNGSKKWEIPAEPYPEETSLFKNKALRTRLQRKDDG
NGSFGLFSLDGKLEGLCFVLKLNENTWLNNRGEDFYVPFLTSTSLPVESEAAQVSEKTPK
TNQEVSESGFTDEIITEIRNLAIDISSHKSQKRNVKEVQINILQEIEKLAAEAYSIFRST
TPTFTPESVLEAEVEEPEIKISSGTGTGFEILCQGFNWESHKSGRWYQELQEKADELASL
GFTVLWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKETVKKFHKVGIKVLGDAVLNHR
CAHFKNSNGVWNLFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKD
IKEWLCWMREEVGYDGWRLDFVRGFWGGYVKDYMDASKPYFAVGEYWDSLSYTYGEMDYN
QDAHRQRIVDWINATSGAAGAFDVTTKGILHTALQKCEYWRLSDPQGKPPGVVGWWPSRA
VTFIENHDTGSTQGHWRFPGGKEMQGYAYILTHPGTPAVFFDHIYSDYRSEISSLLSLRN
RQKLHCRSEVNIVKSERDVYAAIIDEKVAMKIGPGHYEPPSGSQNWSVAVEGRDYKVWET
S
NT seq 2706 nt   +upstreamnt  +downstreamnt
atgtccaccgttcccattgaaactcttctccaccactctccacttcgccacgcctctcta
aacggagctacaggcttcttcttctccccttcctcgttgaatctccgttgtcatttcgct
tccaagaagctacactcgatcggacgaagaagcatcgtcgtctctggaaacagcttaggt
gagcgtagaaggtccgtcgcggttcgagctagctcctccgatacagctgttgtcgaaaca
acctctcgatcggatgatgacgtcatcttcaagcaggatttccccgtcgagcgaatcgat
aaggcagaaggaaagattagtgtgagattaaagcaagcgaaggagaataaatgggagctg
agtgttggatgtagtcttcctgggaaatggatccttcattggggtgtttcttatgttggt
gatactggcagtgaatgggatcaacctccggaagatatgagaccacctggctctgtttcc
atcaaggactatgccattgagacacctttggggaagttatcagaaggagattcatttcat
gaagttactattaatcttaatctggaaagctctgtagcagctctcaattttgttttgaag
gatgaagaaactggggcgtggtatcagcacaaagggagagactttaaggttcctcttctg
gacgatgttcctgatgatggaaacttgatcggatcaaagaaaggcttcggtgctcttggg
aagctctcaaacattgttgtcaaaccagatgagcctagtgcagatgttcaagaaaaaggg
acgagttcttctggttctacaaaagaaagaaaaggtcttgaagagttttatgaggagatg
ccaattagtaagcatgttgccggtgataactcagtcagtgtcactgcaaagaaatgccct
gaaacatcgaagaacattgtatcgatagaaactgatttaccgggagatgttactgtccac
tggggagtttgcaaaaatggcagtaaaaaatgggaaattccagctgaaccttacccagaa
gaaacatctttgtttaagaacaaggcattacgcactcgtttacagagaaaagacgatggg
aatggatcgtttggattattctctctggatggaaagctcgaaggattatgttttgtgctc
aagttaaatgaaaatacttggttaaataatagaggagaagacttctacgtccctttcctt
acttcaactagcttgcccgttgaatctgaagctgctcaagtgagtgagaagacaccaaaa
acaaatcaagaagtgtccgaaagtggattcactgatgaaatcatcactgagataaggaac
ttggcgattgacatttcctctcacaagagtcagaagaggaacgtaaaagaagtgcaaata
aacattctacaagaaattgagaaacttgctgcggaggcatatagcatattcagaagcaca
actccaacttttaccccggaaagtgtactagaagcagaggttgaagagcccgaaattaaa
atctcctcgggaactggcacaggatttgagatattgtgccagggattcaactgggaatcc
cataaatctgggagatggtaccaggagcttcaagaaaaagccgatgagctagcttcactt
ggattcactgttctgtggttacctccaccgacggaatctgtgtcacctgaagggtacatg
cctaaagacctgtacaacttgaattccagatatggaactattgatgagctaaaagaaacg
gtgaagaaatttcacaaagttgggatcaaagtgttgggagatgctgttttgaatcaccgc
tgtgcacatttcaagaattcaaatggtgtatggaatctatttggagggcgtctgaactgg
gatgatagggcagtagttgcagatgaccctcattttcagggtagaggcaacaagagcagt
ggagataatttccatgctgctccaaacatagatcactcacaggactttgttaggaaggat
atcaaggaatggctatgctggatgagagaagaagttgggtatgatggatggaggcttgat
ttcgtaagagggttctggggaggttacgtcaaagactacatggatgctagcaaaccctac
tttgcggttggtgaatactgggattccctaagttacacttatggagaaatggactacaat
caagacgcacatcgtcaaaggattgttgactggatcaatgcaactagtggagctgctggt
gcctttgatgtcacaaccaaaggaattcttcatacggcgcttcaaaaatgtgaatattgg
agactctcagacccacaagggaagccgcctggtgtagttggatggtggccatctcgtgct
gtaacattcatagagaatcatgatactggctctactcagggtcactggagattcccagga
gggaaggagatgcaaggatatgcttacatcttgactcatccaggaacaccagctgttttc
ttcgaccacatctactcagactaccgttccgagatttcttctcttctgtctctcaggaac
agacagaaacttcactgtcggagtgaggtgaacatagtaaagagtgagagagatgtgtat
gcggctataatagatgagaaagttgcaatgaagatcggaccagggcattacgaaccacca
agcggatctcaaaactggtctgtagccgttgaaggcagagactataaggtgtgggaaaca
tcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system