KEGG   Raphanus sativus (radish): 108828733
Entry
108828733         CDS       T06014                                 
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
  KO
K02945  small subunit ribosomal protein S1
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03010  Ribosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    108828733
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:rsz03011]
    108828733
Ribosome [BR:rsz03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    108828733
  Bacteria
    108828733
SSDB
Motif
Pfam: S1 Stb3 YPEB_PepSY1-2 MAGI_u1
Other DBs
NCBI-GeneID: 108828733
NCBI-ProteinID: XP_018458003
UniProt: A0A6J0LDR4
Position
9:4120242..4122560
AA seq 502 aa
MQTLLIHPSKSLFTSPIRSSGDVYFKSPEKASQFQQFHNRALSLSPFRSSAPCRDFAVRR
FCVSDVQNGGIVAEEEEEELELLNKPNPVPKQDEEEEENERGKKKKKADDDEILEPFLKF
FKHEEEEEEVEEEESEEEMETERVTVEYYDPKPGEFVVGVVVSGNENKIDVSIGADMLGT
MLTKEILPLYDRELDYLLCDLKYDAEEFLVHGKMGIIMDGDGDGEGVGVAEFARQGRPVV
EIGTVIFAEVLGRTLSGRPLLSSRRYFRRIAWHRVRQIKQLNEPVEVKITEWNTGGLLTR
IEGLRGFIPKQELVKRVNSFTELKENVGRRLVVQITRLNEDKNDLILSEKTAWEKQYLRE
GTLLEGTVAKILPYGAQVKLGDSSRSGLLHISNITRRRIGSVSDVLQVDESLKVLVVKSL
FPDKISLSIADLESEPGLFITNREKVFMEAEEMAKKYREKMPTITTRSEITTDPPPPITS
SFPQGKDEEIYANWKWFKFESQ
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgcaaacgcttctcattcatccatctaagtctctcttcacttccccgattcgcagctcc
ggtgacgtctacttcaaatcaccggagaaagcttcgcagtttcagcagtttcataataga
gccctaagcctctctccgtttcgtagctccgctccgtgtcgcgatttcgccgttcggaga
ttttgcgtttccgatgtgcaaaacggaggaatcgtggcggaggaggaggaggaggagctt
gagctgttgaacaagcctaatcctgtaccgaaacaagacgaggaggaggaggagaatgag
cgtgggaagaagaagaagaaagcagacgacgacgagattctcgagccgtttctcaaattc
ttcaagcacgaagaagaagaagaagaagtagaagaagaagaatcggaggaggagatggag
acggagagagtcacggtggagtattacgatcccaagccaggagaattcgtggttggtgtt
gtggtatccggtaacgagaacaagatcgatgtgagcatcggtgcggatatgttagggacg
atgctgacgaaggagatacttcctttgtacgacagagagttggattacttgctgtgtgat
ttgaagtacgacgctgaagagttcttggttcacggtaaaatggggattattatggatggt
gatggcgatggagagggtgttggagttgcggagtttgcgcggcaagggagacctgtggtg
gagatagggacggtgattttcgcggaggttttagggaggacgttgagtgggaggcctttg
ctttcttctagacgttactttaggagaatcgcttggcaccgtgtgaggcagatcaagcag
cttaatgagcctgttgaagtgaagataactgagtggaatactggtgggcttctcacgaga
attgagggtttgagagggtttattccaaagcaggagctggtgaagagagtgaatagcttc
actgagttgaaggaaaatgtgggtcgtagactggttgtgcagataacgcgattgaatgaa
gacaaaaacgacttgatactgagtgaaaaaacagcctgggagaagcagtaccttagagaa
ggaacactcttagaaggaacagttgccaaaatcttaccgtatggagcccaggtcaaactc
ggggatagtagtagaagtggattgctgcacatttcaaacataacccgcagaagaattgga
tctgttagcgacgtgcttcaggtggacgaaagcttaaaagttctggttgtgaaatctcta
tttccagacaagatatctttaagcattgcagatcttgaaagcgagccggggttgttcatc
acaaatagagagaaagtgtttatggaggctgaagaaatggcaaagaagtacagagaaaag
atgcctacgataacaacaagaagcgagattactactgatcctcctcctccgatcacaagc
agcttccctcagggcaaggacgaagagatctatgctaactggaagtggttcaagttcgag
agccagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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