KEGG   Raphanus sativus (radish): 108837794
Entry
108837794         CDS       T06014                                 
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A isoform X1
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    108837794
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rsz03032]
    108837794
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108837794
Enzymes [BR:rsz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     108837794
DNA replication proteins [BR:rsz03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    108837794
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     108837794
    Bloom's syndrome complex (BTR)
     108837794
   FA (Fanconi anemia) pathway
     108837794
SSDB
Motif
Pfam: DEAD Helicase_C RQC HRDC RecQ_Zn_bind ResIII Mei5
Other DBs
NCBI-GeneID: 108837794
NCBI-ProteinID: XP_056849019
UniProt: A0A9W3CBU8
Position
8:complement(1822596..1829694)
AA seq 1188 aa
MINSNQVSRSHLPEVQKPKGPQTNWSEHAKVLEDPSSRTKHLSSSFLYALESQKPRESRD
MAARSIAFPSVNAHTLAHPQIAKAWHALSSLSLNKTYLRPGITPPVDDGGTNGSYSARER
STVKVTCSTDGSFYSNNQQNQSQMGVPGTGRNFHSFPPPVPGDGKTFAEKFPRINDEARE
PESSCAHLNGVEKQFKNSAFAADQLGSGEACLDEIIDDDILQSIDVDQIMMEHYQSTGTP
PPPSVSSLPSRTPPVDKNAPRREEESCLPPELCSNCSHGIKLGLCPEASTHLEQMKNVLI
AISNELLDDDTDLSPDRIQELRQERLLLKKQIQQLEDHIRDKDRQKSQFLSSTATRASQY
ETPKSTNLRFDHPQTDSRAHFNEQGRYASDSWNMPQDSSYSVDRYGLSSAPVEREQYVPR
IIEVTYTEGSNDQKWSSRDFHWTRKLEVSNKKVFGNHSFRPNQREIINATMSGSDVFVLM
PTGGGKSLTYQLPALICQGITLVISPLVSLIQDQIMNLLQANIPAASLSAGMEWSEQLKI
FQELSSEHSKYKLLYVTPEKVAQSDSLLRHLDNLNSRGLLARFVIDEAHCVSQWGHDFRP
DYQSLGILKQKFPNIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPK
TKKCLEDIDKFIRENHFDECGIIYCLSRNDCEKVAQKLQEFGHKAAFYHGSIEPTQRALV
QKQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRASCVL
YYGYGDYIRVKHMISQGGVDQGPMANGYNRVASSGRLLQTNTENLLRMVRYCENEVDCRR
FLQLVHLGEKFDSTNCKRTCDNCCSSQSLIDKDVTLITRQLVELVKQTGERFSSAHILEV
YRGSLNQMVKKHRHETLQFHGAGKHLTKLEVSRILHYLVTEDILVEDVRKSDMYGSVSSL
LKVNKSKAASLFSGSQTIMMRFPSSVKVLKPCRAAAATPAKAPLISTDAPPEDVNLSAIM
YTALRKLRALLVKEAPDGVMAYHIFGNATLQQISKKIPRTKEELLEINGLGKAKVTKYGD
RLLETIEATVNEYHGISKKEESMISPDSGKRRRDENISPNVAEEDDDFAESSSQSCKKTV
RSKSNEVLHGESVDGDGVGMVIEKLDFDFEDEDEDVSEIRPEGRVLPW
NT seq 3567 nt   +upstreamnt  +downstreamnt
atgattaactcaaatcaagtaagtaggagtcatctccctgaagttcagaaacctaaaggt
cctcagaccaattggtcagaacatgcaaaggtgctcgaagatccgtcgtccaggactaag
catttgagctccagtttcctttacgctctagaaagtcaaaagcctagggaaagcagagat
atggccgcaaggtcaattgcgtttcctagtgtgaatgcgcatactttggcgcacccgcaa
attgcaaaggcttggcatgctctttcaagtctctcattaaataagacctacctgagacct
gggattactcctccggttgacgatggtggcaccaatggctcatattctgcaagagagaga
tccactgtgaaagttacatgtagcactgacggttctttttattcgaacaatcaacaaaat
caaagtcaaatgggtgtaccaggaactggaagaaactttcacagctttcctccccctgtc
cctggtgatggtaaaacatttgctgaaaagtttccacggataaatgatgaggccagagaa
ccagaaagcagttgcgcgcatttaaatggtgtggagaaacaattcaagaattctgcattc
gcagctgatcagttgggatctggagaagcatgtcttgatgagattattgatgatgacata
cttcagagtattgatgtcgaccaaattatgatggaacactaccaatcaacaggtactcct
cctccgccatccgtatctagtttgccatcgagaaccccacctgtggataaaaatgctccc
agaagagaagaagagagttgtctgcctcctgaattatgttctaactgcagtcatggaata
aagctagggctttgtccagaagcttcgacccatttggaacaaatgaagaacgtgttgatt
gcaatatcaaatgaactccttgacgatgataccgatctgagtcctgatcgtattcaagag
cttcgtcaagagaggttactgctgaagaagcaaattcagcagctcgaggaccatattcga
gataaagataggcaaaagtctcagtttttgtcatctacagctactcgtgcttcacagtat
gaaacacctaagtcaacaaatctaagatttgatcatccacaaactgattctcgagcacac
tttaatgagcaaggaagatatgcatctgatagctggaacatgccacaagactcttcatat
tctgtagataggtatggtctttcatctgctcctgtagagagagaacaatacgttccaagg
attatcgaggtgacgtacactgaaggttccaacgaccaaaagtggagcagtcgtgatttc
cattggacgagaaaattagaggtcagtaacaaaaaagtgtttggaaatcactcgtttcga
cctaaccagagagaaatcatcaacgcaacaatgagtggctctgatgtatttgtgttgatg
ccaactggaggaggcaagagtttgacgtatcagctccctgctctgatctgtcaaggaata
acattagtcatttctccacttgtctcacttattcaagaccagataatgaacctattgcag
gcaaatatacccgctgcttccctaagtgccggcatggaatggtccgaacaactgaagatc
tttcaggagcttagttccgagcattctaagtacaaattactatacgtcacacccgaaaaa
gttgcacaaagcgattctcttttgaggcatctagacaacttaaactctcgtggtttgctt
gctcgatttgttattgatgaagctcattgtgtgagccaatgggggcatgactttcgacca
gactaccagagtcttggtatcctgaagcagaagtttcccaacattcccgtgttagcttta
acagctaccgcaacagccagtgtgaaagaagacgttgtacaagcccttggccttgttaac
tgtgttgtgttccggcaaagttttaatcgccccaatctatggtattctgttgttcccaag
acgaaaaagtgtctggaagatattgacaaattcatcagggaaaaccattttgacgaatgt
ggaattatatattgtctttcaagaaatgactgtgagaaagttgctcaaaagttacaggag
ttcggtcataaagcagcattctaccatggcagtatagagcctactcaacgtgctttagta
cagaaacaatggagcaaggacgaagtcaatataatatgtgctaccgttgccttcggaatg
ggaatcaacaagcctgatgtccgctttgttattcatcactcgctccctaagtctatagaa
ggctatcatcaggaatgtggtcgtgctggcagggatggccagcgggcatcttgtgttctg
tattacggttatggcgactatatacgagttaagcatatgattagccaaggaggagttgac
caaggccccatggcaaatggttataatcgtgtagcaagttctgggagattacttcaaacg
aacactgaaaaccttctccgcatggttaggtactgtgaaaacgaggtggactgccgacgt
ttcctacaactagttcatttgggggaaaagttcgactccacaaactgcaaaaggacgtgt
gataactgttgcagtagccagagtttgattgacaaagatgtcactttgattacaaggcaa
ttggttgaactggtgaagcaaacaggagaaaggttttcttcagctcatattctcgaagtc
tacagaggttccttaaaccaaatggtgaagaaacacagacacgagacgttgcagttccat
ggagctggaaaacatttaacgaaacttgaagtctcccggatcttgcactatctcgtaaca
gaggacattcttgtggaagatgttaggaaaagtgatatgtacggatccgtatcatcgttg
ctcaaggtgaataaatcaaaggctgcctcactcttttctggaagccagactataatgatg
aggttcccttcttctgtaaaagtattaaagccctgtagagccgccgcggcaacccctgca
aaagctcctttaatatcaacagatgctcctccagaagatgtgaatctctccgccatcatg
tacacagccttgaggaagcttcgtgcgcttcttgtcaaagaagcccctgacggtgtcatg
gcatatcatatatttggcaatgcaacgcttcagcagataagcaagaagattccgagaacc
aaagaggaactactagagataaatggccttgggaaggccaaagtgaccaagtacggtgat
cggttgttggaaacaatagaggcaacggtcaacgagtaccatggaattagtaagaaagaa
gagtccatgattagtccggattcagggaagaggagaagagacgagaacattagtccgaat
gtagccgaggaggatgatgatttcgcagagagctctagccagtcttgcaaaaaaacggtg
agaagcaaaagcaatgaggttcttcatggggaatctgttgatggagatggagtaggtatg
gtcatagagaagctagattttgattttgaagacgaagatgaagatgtgtcggagatacga
ccagagggaagagtattaccctggtga

DBGET integrated database retrieval system