KEGG   Raphanus sativus (radish): 108839854
Entry
108839854         CDS       T06014                                 
Name
(RefSeq) tRNase Z TRZ1
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rsz03016]
    108839854
Enzymes [BR:rsz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     108839854
Transfer RNA biogenesis [BR:rsz03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    108839854
 Prokaryotic type
    108839854
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B PDEase_II
Other DBs
NCBI-GeneID: 108839854
NCBI-ProteinID: XP_018468133
UniProt: A0A6J0M832
Position
2:complement(2551669..2556834)
AA seq 330 aa
MMPNPKEYRNLILIIILETKPLRDFSSNTSCSIPQKRKERFKVVVMESETKKKKHLMEIE
GYPIDGLSIGGHETCIMFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHIGGLPMYVATR
GLYKMKPPTIIVPTSIKECVESLFEVHRKLDSSELKHNLVGLDIGEEFIIRKDLKVKAFK
TYHVIQSQGYVVYSTKHKLKQEYVGLPANEIKNLKASGVEITNSITTPEVAFTGDTTSDF
VVDENNADALKARVLVMESTFLDDSVSVEHARDYGHIHLSEIVKHAEKFENKAILLIHFS
ARYTVEEIEAAVSTLPPPLEGRVYALTQGF
NT seq 993 nt   +upstreamnt  +downstreamnt
atgatgcccaatccaaaagagtacagaaacctaattctaattatcatattggaaacaaaa
cctctccgagacttttcatcgaacacttcgtgctcaatccctcagaagagaaaagaaaga
ttcaaagtcgtagtaatggagagtgagacgaagaagaagaagcatctaatggaaatcgaa
ggctaccctatcgacggattatcaatcggaggtcacgagacttgcatcatgttcccttct
cttcgtatagctttcgacatcggccgttgcccacaccgcgcaatctcccaagacttcctc
ttcatctctcactcccacatggatcacatcggtggactgccaatgtatgttgcgactaga
gggttgtataagatgaagcctccaacgattatagtgcccacgtcgattaaagagtgtgtt
gagagtttgttcgaggttcataggaagctagattcttcagagctgaagcataatcttgtc
ggcttggacattggggaggagtttattatcaggaaagatcttaaagtgaaagcctttaag
acataccatgtcatccaaagccagggttatgtagtgtattcgactaaacataaactcaag
caggagtatgttggtcttcctgcgaatgagattaagaacctgaaggcttctggtgttgag
atcacaaacagtataacaactcctgaagttgcgtttacgggagatacaacttcagatttt
gtagttgatgagaataacgctgatgctctcaaggcaagggtactcgtcatggagagcacg
tttcttgatgattcggtatcagtagagcacgctagggattatggacatatacatttatct
gagatagttaagcatgctgaaaagtttgaaaacaaagcaatcctgctgattcatttctcg
gctcggtatacagtggaggaaatcgaagctgcagtttctacattgcctccacctttagag
ggacgtgtgtatgctttaacacaaggattctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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