KEGG   Raphanus sativus (radish): 108842522
Entry
108842522         CDS       T06014                                 
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108842522
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rsz01009]
    108842522
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108842522
   03036 Chromosome and associated proteins [BR:rsz03036]
    108842522
Protein phosphatases and associated proteins [BR:rsz01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     108842522
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     108842522
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     108842522
SSDB
Motif
Pfam: B56 Peptidase_S49_N
Other DBs
NCBI-GeneID: 108842522
NCBI-ProteinID: XP_018470958
UniProt: A0A6J0MGA4
Position
2:25208277..25210394
AA seq 489 aa
MFKKIMKSGSRKTSRNDAADDPMFGFDPASTNMVVNHASRPSSPATPKQQQPPPMHSIEP
LPLFRDVPPHERQPLFLRKLQICSFHFDFTTPLQNLREKEIKRQTLLELVDFIQSKTTTI
TELCQQEMVKMISLNIFRSLPPSPHGQQSPLLAADPDEDEPYLDPAWPHLHLVYELLIRY
LLPSDTTDTKIAKRYIHHSFVSNLLHLFETEDPREREYLKTILHRIYGKFMVHRPFIRKG
INNIFYRFVYETERHSGIGELLEILGSIINGFALPMKEEHKLFLIRALIPLHKPKAIAVY
HQQLAYCVVQFVEKDYRLADTVIKGLLKFWPVTNCTKEVLFLGELEEVLEATQPVEFQRC
MVPLFRQVARCLNSSHFQVAERSLFLWNNEHIVVLIAQNRSVILPIIFASLEKNTESHWN
QAVHGLSSNIKRMFMEMDPELFEECQQEYEEKQAKWKEVEEQRQSRWRRLDEAVEERERV
GGEDHMIVS
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgtttaagaagatcatgaaaagcgggagccgaaagacctcccgaaacgacgccgccgat
gatcccatgttcggattcgatcccgcctccaccaatatggttgtgaaccacgcatctcgc
ccttcttctcccgccacccccaaacaacaacaacctcctccaatgcactcaatcgagcct
ctccctctattcagagacgtcccaccccacgagcgccaacccctcttcctccgaaaactc
caaatctgctccttccacttcgatttcaccacccccctccaaaacttgcgcgaaaaagag
ataaagaggcagactctactcgagctagtcgatttcatccaatccaaaaccaccaccatc
accgagctctgccaacaagagatggtcaaaatgatctccctcaacatcttccgctccctc
cctccctctccccacggccaacaatcccccctcctcgccgccgaccccgacgaagacgag
ccttacctagaccccgcctggcctcacctccacctcgtctacgagctcctcatcagatac
ctcctcccttccgacaccaccgacaccaagatcgccaaacgctacatccaccactccttc
gtctccaacctcctccacctcttcgagaccgaggatccgagggagagagagtacttgaaa
accatactccacaggatctacgggaagttcatggtccacaggccgtttatcaggaaaggc
atcaacaacatattctaccggttcgtctacgagaccgagaggcattccgggatcggggag
cttctggagattctcgggagtattataaacggtttcgccttgcccatgaaggaggagcat
aagctgtttttgatcagggcgttgatacctctgcataagcctaaggctatcgctgtctat
catcagcagttggcttactgtgtcgttcagtttgtggagaaggattatcggcttgcggat
actgtgattaagggtttgttgaagttttggcccgtgactaactgtacgaaggaggttctg
tttcttggtgagctcgaagaggttcttgaggcaacgcagcctgttgagttccagaggtgt
atggttccgctgtttcggcaggtggctcggtgccttaatagctctcattttcaggttgcg
gaacgatctctgttcttgtggaacaacgagcatattgtggttttaatcgctcagaaccga
agtgtgatacttccaatcatattcgcttccctggagaaaaacacagagtctcactggaac
caagcggttcatggtctaagttcgaatataaagagaatgtttatggagatggaccctgag
ctgtttgaagaatgtcagcaagagtatgaagagaagcaagccaaatggaaagaagtggaa
gagcagcgccagagtaggtggaggagattagatgaagcagtggaagagcgtgaaagagta
ggaggagaagatcatatgatcgtttcttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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