KEGG   Raphanus sativus (radish): 108842795
Entry
108842795         CDS       T06014                                 
Name
(RefSeq) alanine--tRNA ligase, chloroplastic/mitochondrial isoform X1
  KO
K01872  alanyl-tRNA synthetase [EC:6.1.1.7]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    108842795
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rsz01007]
    108842795
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rsz03016]
    108842795
Enzymes [BR:rsz01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.7  alanine---tRNA ligase
     108842795
Amino acid related enzymes [BR:rsz01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   108842795
Transfer RNA biogenesis [BR:rsz03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    108842795
 Prokaryotic type
    108842795
SSDB
Motif
Pfam: tRNA-synt_2c DHHA1 tRNA_SAD CDH1_2_SANT_HL1 HATPase_c DUF3216
Other DBs
NCBI-GeneID: 108842795
NCBI-ProteinID: XP_018471324
UniProt: A0A6J0MGT7
Position
2:complement(20455089..20459185)
AA seq 976 aa
MSFSRASLFDFPLLKPLVLSHPSSVFSCRRFVTRTVPGLSPAVLLPTRPTQIIAKSSSVT
VQPVSEDASEDHHHHQSEDVSGDSIRRRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGM
LQFKPVFLGKVPREVPCATTAQRCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKREAI
RWAWELSTVEFGLPADRVWVSIYQDDDEAFEIWKNEVGVPVERIKRMGEADNFWTSGPTG
PCGPCSELYYDFYPERGTGDDVDLGDDSRFIEFYNLVFMQYNKTEEGLLEPLKQKNIDTG
LGLERIAQILQKVPNNYETDLIYPIIAKVLELANISYDSADEKAKTSLKVIADHMRAVVY
LISDGVVPSNIGRGYVVRRLIRRAVRKGKSLGIDGDGKGSLKGAFLPTVAEKVIEMSAYI
DSDVKQKSPRILEEIRQEELHFKKTLERGEKLLDQKLLDALSTSDKTPCISGKDAFILYD
TYGFPVEITAEVAEERGVSIDMDGFEVEMENQRRQSQAAHNVVKLTVEDGDDITRDIDDT
EFLGYDSLSARAVVKSLLVGGKPVIRVSEGSEVEILLDRTPFYAESGGQIADHGFMYVNS
DGSQDDAVVEVSDVQKSLKIFVHKGVVKSGALEVGKEVEAAVDADLRQRAKVHHTATHLL
QSALKKVVGQDTSQAGSLVAFDRLRFDFNFNRPLHDGELEEIECLINRWIGDATRLETKV
LPLADAKRAGAIAMFGEKYDDEVRVVEVPGVSMELCGGTHVGNTAEIRAFKIISEQGIAS
GIRRIEAVAGEAFIEYINSRDSQMKRLCSTLKVKAEDVTNRVDNLLEELRTARKEASDLR
SKAAVYRASVISNKAFTVGTSQTVRVLVESMDDTDADSLKSAAEHLVSTLEEPVAVVLGS
CPDKDKVSLVAAFSPGVVSLGVQAGKFIGSIAKLCGGGGGGKPNFAQAGGRKPENLSSAL
EKAREELVATLSEKLG
NT seq 2931 nt   +upstreamnt  +downstreamnt
atgagtttctcgagagcaagcctcttcgatttccctcttcttaaaccactcgtgctttct
catccctcctctgttttctcttgcagacgttttgtcaccagaaccgtcccgggtctttct
cctgctgtcttgttgccgacaagaccaactcagattattgctaagagctcatcagtaaca
gtacagcctgtgtctgaggacgctagcgaagaccatcatcatcatcagtccgaagatgtt
agtggagattcaatacggagacgttttcttgacttctacgcctctcgtggccataaggtg
ctcccaagcgcctctcttgtaccagaagaccccaccgtcttgctaaccatcgctgggatg
cttcagttcaagcctgttttccttgggaaggtaccgagagaggttccttgtgcgacaacc
gcacagagatgcatacgcacaaacgatttggagaacgttggaagaacggccaggcaccat
accttcttcgagatgcttgggaacttcagtttcggtgattacttcaagagagaagcgatc
agatgggcgtgggagctgtccacagtagagtttgggctacctgctgacagagtttgggtc
agcatctaccaagacgacgacgaggcttttgaaatctggaagaatgaagtcggtgtgcct
gttgagcggatcaagagaatgggtgaagctgacaacttctggaccagtggaccgactggt
ccttgcggtccctgctcggagctgtactatgacttctaccctgagagagggactggtgat
gatgttgaccttggggatgattcaagattcattgagttctataacttggttttcatgcag
tacaacaagacggaggaagggctgcttgagcctttgaagcagaagaacatagacactggt
cttggcttggaacgtatagctcagatccttcagaaggttccaaacaactacgagacggat
ttgatatatccaatcatagcaaaggttttggagttggcgaatatctcatacgactctgca
gatgaaaaggcgaaaacgagtttaaaagtgattgcagatcacatgagagcagttgtttat
cttatatcagacggtgttgtgccttcgaatattggtagaggttatgtagtgaggaggttg
ataagaagagctgttcgcaaggggaagtcactggggatagatggagatgggaaaggtagt
ttgaagggagcttttttaccaacagttgctgagaaagtgatagagatgagcgcttatatt
gactcagatgtgaaacaaaagtccccacggatccttgaggagattaggcaagaggagctt
cacttcaagaaaactctggaaagaggggagaagctacttgaccagaagcttcttgatgca
ctgtcaacatctgataaaacgccttgtatatctggaaaagatgcgtttattctctatgac
acatacggtttccctgtggagataacagcagaagtggctgaagagcgtggagtcagcata
gacatggatggtttcgaagtggagatggagaatcagagacgtcagtcacaagccgctcac
aatgttgtgaaactaacagttgaagatggagatgacatcacgagagatattgatgatact
gagtttcttggatacgacagtctctctgctcgtgccgttgtgaagagtcttttggttggt
gggaagcctgtgataagggtttctgaagggagtgaggtggagattctgcttgatagaact
ccgttctacgctgagtcaggaggacagattgcagatcatggttttatgtatgttaacagt
gatgggagccaagatgatgctgttgtggaggtgagtgatgtgcagaagtctcttaagatt
tttgttcacaagggtgtagtgaaaagtggagctttggaagttggtaaggaggtggaagca
gctgtagatgcagacctaagacaacgagcaaaggttcatcatacggccacacatttgctg
caatcagcacttaagaaagtagtaggacaagacacatcacaggctggttcattagtagct
tttgaccgcctccggtttgatttcaattttaaccggcctctacatgatggtgagcttgag
gaaatagaatgcctgatcaataggtggattggtgatgctacacgtcttgaaacaaaagtc
cttcctcttgctgatgctaaaagagctggagccattgcaatgtttggtgaaaaatatgat
gacgaggttcgtgtagtggaagttcctggtgtctccatggaactttgcggtggcactcac
gttggaaacactgcggagataagagccttcaagattatctcagaacagggcattgcctct
ggaatcagacgtattgaagcagttgcaggtgaagcattcattgaatacataaactcgcga
gattctcaaatgaaacgtctatgctccactctcaaggtgaaagcagaggatgttacaaac
agagttgataatcttttggaggagctgcgtactgctagaaaagaagcatcagacttgcgc
tcaaaagcagcggtttatagagcatctgttatatcaaacaaagcattcactgtcggaact
tcacagacagtaagagtgctggttgagtcgatggatgacacagatgcagactctttaaag
agtgcagccgagcatttggtaagcacacttgaagaaccagtggctgtggtactaggatca
tgtccagacaaagacaaggttagtttagtggctgcattcagtccaggagtagtgtctctg
ggagttcaggcagggaagttcattggttcgatagctaagttgtgcggaggaggaggtggt
ggaaagcctaacttcgctcaagcaggtggcagaaagcctgagaatctctcgagtgcattg
gagaaagctcgggaagaacttgtggcaactctatccgaaaagcttgggtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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