KEGG   Raphanus sativus (radish): 108850159
Entry
108850159         CDS       T06014                                 
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform
  KO
K03456  serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108850159
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rsz01009]
    108850159
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108850159
   03036 Chromosome and associated proteins [BR:rsz03036]
    108850159
Protein phosphatases and associated proteins [BR:rsz01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     108850159
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     108850159
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     108850159
SSDB
Motif
Pfam: HEAT HEAT_2 HEAT_EZ Vac14_Fab1_bd Htt_N-HEAT_1 PDS5 SCD Adaptin_N CLASP_N Cnd1 CEP104-like_TOG
Other DBs
NCBI-GeneID: 108850159
NCBI-ProteinID: XP_018479243
UniProt: A0A6J0N5R0
Position
1:complement(11343057..11346452)
AA seq 591 aa
MAMVDEPLYPIALLIDELKNDDTQLRLNSIRRLSTISRALGEERTRKELIPFLSENSDDD
DDEVLLAMAEELGVLMIPCVGGVEHAHVLLPPLESLCTVEETSVREKAVDSLCKIGCQMR
GSDLVDSFVPLVKRLAAGEWFAARVSACGLFHVAYRGCTDVLKTELRSSYSQLCQDDMPM
VRRAAASNLGKFATTVESSYLIAEIMAMFDHLTKDEQDSVRLLAVEGCAALGKLLEPQEC
VARIIPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDSTKTDLVPAYVGLLRDNEAEVRI
AAAGKVTKFCQLLNPELVIHHILPCVKELSSDSSQHVRSALASVIMGMAPILGKDSTIEH
LLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAII
EYVPLLASQLGIGFFDDKLGALCMQWLQDKVHSIREAAANNLKRLAEEFGPEWAMQHLVP
QVLEMVTDPHYLHRMMVLRAISLMAPVMGPEITCSKFLPVVVEASKDRVANVKFNVAKLL
QSLIPIVDQSVVEKTIRQCLVELSEDPDVDVRYFANQALRSIDEAAAVAQS
NT seq 1776 nt   +upstreamnt  +downstreamnt
atggccatggtggatgaacccttgtatcccatcgctctgctcatcgacgagctcaagaac
gatgacacacagcttcgcttgaactccatccgtcgcctctccacaatatcccgcgccctt
ggagaggagcgcacgaggaaagagttaatccccttcctgagtgagaacagtgacgatgac
gacgacgaggtgctcctcgcgatggccgaggagctaggagtgttgatgatcccctgcgtt
ggaggtgttgagcatgcgcatgtgcttctccctcctcttgagtctctctgcactgtcgaa
gagacatccgtgagagagaaagccgtggactcgctttgtaagattggttgtcagatgaga
ggaagtgatcttgtggactccttcgtccctcttgtgaagagacttgcagctggtgaatgg
tttgcagccagagtttcagcgtgtggtttgtttcatgttgcgtaccgaggctgtactgat
gtgctgaagacggagttacggtctagttatagccagttgtgccaagatgatatgcctatg
gtgcgaagagctgctgcttctaacttggggaagtttgctactactgtggagtccagctat
ttgattgctgagatcatggctatgttcgatcatcttactaaagatgagcaagattctgta
agactgttggctgtggaaggctgcgcagctcttggaaagttgttggaaccgcaggagtgt
gttgcacgcattatacctgttattgttaatttctctcaggataaatcttggagggtgcgg
tacatggttgctaatcagctatatgaactttgtgaggcagtgggtcctgattccacaaag
acggatttggtaccagcatatgtggggctgctacgggacaacgaggctgaagtgagaata
gcagcagcaggaaaagtgaccaagttctgccagcttttgaatccagagcttgtgattcac
cacatccttccttgtgtgaaggaattatcatccgattcgtctcaacatgtccgctctgct
cttgcctctgtaataatggggatggctcctatccttggcaaggattcaaccattgagcat
ctgctaccaatttttctttcacttttgaaagatgaatttcctgatgtacggctcaacatc
ataagcaagctagaccaagtcaaccaggttattgggatcgatctgctatcacaatccttg
ttgccggcgattgtagagcttgctgaggatcggcactggagagttcggcttgctataatt
gagtacgttcctctgttggctagccagttaggtatagggttcttcgacgacaagctcgga
gccctttgcatgcaatggctgcaagacaaggtccactctatccgtgaagctgcagcaaac
aacctaaagcgccttgcagaggagttcggtcctgaatgggcaatgcaacacttagttcca
caggtattggagatggtgaccgatccgcactacctacataggatgatggttctacgagca
atatctctcatggctcctgtaatgggaccggaaattacatgctctaagtttcttcctgtg
gtggttgaggcatcaaaagacagggtggcaaacgtgaagttcaatgttgcaaaacttctc
caatccctcatccccatagtcgaccaatcagtggtggagaaaacaatacggcagtgcttg
gtggagctgagcgaggaccctgatgttgatgttcgttattttgcaaaccaagcacttcgt
tccattgacgaagctgccgcagttgcacaatcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (23)   

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