KEGG   Raphanus sativus (radish): 108853903
Entry
108853903         CDS       T06014                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI7
  KO
K11968  ariadne-1 [EC:2.3.2.31]
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rsz04121]
    108853903
Enzymes [BR:rsz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     108853903
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    108853903
SSDB
Motif
Pfam: IBR Ariadne ARI1_UBAl zf-RING_2 zf-RING_5 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX
Other DBs
NCBI-GeneID: 108853903
NCBI-ProteinID: XP_018482882
UniProt: A0A6J0NDS0
Position
4:37493803..37498304
AA seq 560 aa
MDSEEDMLDAHDMYSGEDDFYSDDYKDSDGDGDGDDDDDGEPDYGFVEEDADDSAMIASH
RSQKNFSVLREEDILRHQRDAIERVSVVLSITQVEASILLRYFHWSVGKVHDEWFADEER
VRNTVGILERPVVPPSVDTELTCGICFDPYPPEKIASVSCGHPFCTTCWTGYISTTINDG
PGCLMLRCPDPSCLAAVGHDMVDKLASEEDKDKYNRYFLRSYIEDNRKMKWCPAPGCEYA
IDFVAGSGNYDVSCLCSFSFCWNCTEEAHRPVDCSTVSKWILKNSAESENMNWILANSKP
CPRCKRPIEKNQGCMHMTCTPPCKYEFCWLCLGAWMDHGERTGGFYACNRYEVAKQEGQY
DETERRREMAKNSLERYTHYYERWASNQTSRQKAMTDLQQLQTHNLEKLSDKQCTPESQL
KFILEAWLQIIECRRVLKWTYAYGYYLPDHEHAKRQFFEYLQGEAESGLERLHQCVEKDL
LQFLNAEGPSKDFNDFRTKLAGLTSVTKNYFENLVKALENGLADVDSRAACSSKSTSSKS
TGCSSKTRGKGKGSSRSGGS
NT seq 1683 nt   +upstreamnt  +downstreamnt
atggattccgaagaagacatgctcgatgcgcacgatatgtactcaggtgaggatgatttc
tacagcgatgattacaaggatagcgatggtgatggtgatggtgatgatgatgatgatggg
gaacctgattacggctttgttgaggaagacgctgacgattctgccatgatcgcctctcat
cgctctcagaaaaactttagtgttctgagggaagaagatattctgaggcaccagagggat
gctattgagcgagtttctgtcgtcctctctattactcaagtcgaagccagtattctgctt
cgttacttccactggagtgttggtaaagttcatgatgaatggtttgctgatgaagagaga
gtccggaatactgtgggcatattagagagacctgttgttccaccatctgttgacactgaa
cttacatgtggaatctgtttcgatccttaccctcctgagaagattgcttcggtttcttgt
ggccatcctttctgcactacctgctggacaggttatatcagcacaactattaatgacggc
ccgggatgtttgatgctaagatgtcctgacccatcttgtctagctgctgttggtcatgat
atggttgacaaattagcgtctgaagaagataaggacaagtacaatagatactttcttagg
tcttatattgaagacaacagaaagatgaagtggtgtcctgccccggggtgtgaatatgcg
attgattttgttgccgggtctggaaactatgatgtttcttgcctgtgctcgtttagcttc
tgctggaattgcacagaagaggctcaccgacctgtggattgtagcaccgtttcaaaatgg
atactaaagaacagtgctgaatctgaaaatatgaattggatacttgccaattcaaagcct
tgtcctagatgcaagcggccaattgaaaaaaatcagggctgtatgcatatgacatgcaca
ccgccttgtaaatatgaattttgttggctttgtcttggtgcgtggatggaccatggggaa
agaactggtggtttttatgcttgtaaccggtacgaggtggccaagcaagaagggcagtat
gatgagactgaaaggaggagagagatggccaaaaactcactggagaggtacacacattat
tatgaacgctgggcaagcaatcaaacgtcgaggcaaaaggctatgacggatctgcagcaa
ttgcagacgcataatcttgagaagcttagtgataagcagtgcacaccagaatctcagctc
aaattcatcttagaagcttggcttcagattatcgaatgtaggcgagtcttgaaatggaca
tatgcgtatggatactacctacctgatcatgaacatgctaagcgacaatttttcgagtat
ttgcaaggggaggctgagtcaggtttggagaggcttcatcaatgcgtagagaaggacttg
cttcaatttctcaacgcagaaggcccatcaaaagatttcaatgatttccggacaaaacta
gctggtttgaccagcgtaactaaaaactactttgagaacttggtgaaagctctggagaac
ggtcttgctgatgtagactcacgcgcggcttgcagcagcaaatcaacaagctctaaatca
acaggttgcagtagcaaaacaagagggaaaggcaaaggaagttccagaagtggtggatca
taa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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