KEGG   Raphanus sativus (radish): 108854787Help
Entry
108854787         CDS       T06014                                 

Definition
(RefSeq) protein HASTY 1-like
  KO
K14289  exportin-5
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03013  RNA transport
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 RNA transport
    108854787
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rsz03016]
    108854787
   03036 Chromosome and associated proteins [BR:rsz03036]
    108854787
Transfer RNA biogenesis [BR:rsz03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    108854787
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     108854787
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Xpo1
Motif
Other DBs
NCBI-GeneID: 108854787
NCBI-ProteinID: XP_018483952
Position
Unknown
AA seq 1205 aa AA seqDB search
MDAASNNTTASNVAQAILAVLDYNSTPDARRAAVAFLESIKCGDIRVLAHVSLFLVKKEC
SSEIRLHAFKMLQHLVRLRWEELSPSERRDFAKVSVDLMSEIASPSEEWSLKSQSAALVA
EIVRREGPDLWQELFPSLTSLSAQGPLQAEVVSMMLRWLPEDITVHNEDLEGDRRRLLLR
GLTQSLPEILPLLYNLLERHFGAAMNEASRLHADLAKQHAAVVIACLNAINAYAEWAPVL
DLSRYGIINGCGALLSSPDFRLHACDFFKLVCSRKRPSDVFGTEYDAAISSLFQSLMNVS
REFLYRSASSGGGIDESDYEFAECICESLVSLGSTNLQCIATDGGVLALYLQQMLGFFQH
FKLGLHFEAMLFWLALMRDLLTKPKAAANPSGEGLAIGGIQSSSQVDNEKKKILGLISDD
IASTILDVSFQRMLKKEKVSPRIAPSLGPLELWSDEFEGKGEFGQYRSRLLDLVKFVTSH
KPLVASTKISERIITLIKDLLASPVPLQDVAVLDSQQLAFDCVVATVFDGSNEFAGGSSD
VHFSLRGIFEGLLQQLLSLKLTEPELIKMHGHYLDAMGPFLKYFPDAVGNVINKLFEMLT
SLPHMVKDPATSTSRVARLQICTSFIRIAKTADKSVLPHMKSIADRMAYMQREGTLLRGE
HNILGEAFLVMASAAGAQQQQEVLAWLLEPLSQQWIQSEWQNCYLSDPMGLVRLCSNTPF
MWSLFHTVTFFEKALKRSGHRKTNLNTTSVTSQDLHPMAHHLSWMLPPLLKLLRVIHSLW
SPSVYQTLPPEMRAAMTMADVERYSLLGEAIPKFSKVSSVYADGSFDGGKEGLTEANESD
VRNWLKGIRDSGYCVLGLSATIGDTFFKCLDANYVAVALMENLQSMEFRHMRQLIHSFVV
YVVKSCPADMWESWLEVLLHPLFIHCQKAISSSWASLMREGRAQVPDSFGVQNGPDMKLE
VMEEKLLRDLTREIANLLSTMASPGLNPGLPVLEHSGPVGRIDVSSPKDLLAFKSNSMVG
YLLNHKNVALPALQFCLEVFTWTDGETTTKVCCFCGVVVLLTILTNNVELREFVSKDLFS
AVIRGLAMESNAVNSADLVNLCREIFIYLSDRDPAPRQVLLSLPCLTPNDLRAFEEAVGK
TPSPKEQKQLMRSLLLLGTGNNLRALAAQKTMNVITNVTLRTRGPASTSEAKEDEGETIG
LASVL
NT seq 3618 nt NT seq  +upstreamnt  +downstreamnt
atggatgctgctagcaacaacaccaccgctagtaacgtcgcccaagcgattctcgccgtc
ctcgattacaactccactcccgatgctcgcagagctgccgttgcattcctcgaatccatt
aagtgtggagatatcagggttctagcacacgtgtccttatttcttgtgaagaaggaatgc
tcttcagaaatccgtctgcatgccttcaaaatgttacagcatctggttagactacggtgg
gaagaattaagcccctcagaacgcagggattttgctaaggtctctgttgacctaatgtca
gagattgctagtccatctgaggaatggtctctgaagagtcagtcagctgcccttgtagct
gagatagttagaagagaaggacccgatctttggcaggagttgtttccttcactaacttcc
ttatctgcacagggcccattacaagctgaagtggtctcaatgatgctcagatggcttcct
gaagatattacagttcacaatgaggacttggaaggagacaggcgtcggctgctgttgcgg
ggacttactcaatctttgcctgagattttacctttattgtataatcttctcgagagacac
tttggagctgcaatgaatgaagctagtaggctacacgctgacttagcaaaacagcacgcg
gctgtggtcatagcttgtttaaatgccatcaatgcatatgccgaatgggctcctgtttta
gatctttctagatacggaatcattaacgggtgcggtgcgttactttcctctcctgacttc
cgtcttcatgcttgtgattttttcaaacttgtctgctcaagaaaaagacccagtgatgtt
tttggtacggaatacgatgctgcgattagcagtctgtttcagagtctgatgaatgtctcc
agagaattcttatacagatcagcatcgtctggtgggggtatcgatgaaagtgattatgag
tttgctgagtgtatatgtgaaagcttggtttctttaggctcaacaaacctccaatgtatt
gccactgatggtggtgtactggctctctaccttcaacagatgcttggtttctttcaacac
tttaagttgggtcttcactttgaagcaatgctcttctggctggcattaatgagggattta
cttacaaagccaaaggctgccgctaatccaagtggagagggactagcaattggtggcatt
caaagttcaagccaagttgataacgaaaagaaaaagattttaggtcttattagtgatgac
atcgctagcacaatcctggatgtatctttccagcggatgctcaagaaagaaaaagtttct
ccacgaattgctccttctcttgggcctttagaactgtggagtgatgagttcgaaggaaag
ggagagtttggccaataccgatcaaggcttctagacttggtcaagtttgttacttctcac
aagcccctagttgccagtactaaaatatctgaaaggattatcaccctcattaaggatcta
ttggcttctccagtgcctcttcaggatgtggcagtgttggacagccagcaactggctttt
gattgtgttgtagcaacggtttttgatggatccaatgagtttgcaggtggtagttctgat
gttcatttttcattgcgtggaatatttgagggcttgctacagcagcttctctcattgaaa
ttgaccgagccagaacttataaaaatgcatgggcactatctggatgcaatgggtcccttt
ctcaagtatttcccagatgcagttggaaatgtgatcaacaaattgtttgaaatgcttacc
tctcttccgcacatggtcaaggatccagcaactagtacttcaagagtcgcaagattgcag
atttgcacgtcttttatacgtatagctaaaaccgctgataaaagtgttctgcctcacatg
aagtcgattgctgatagaatggcatatatgcaaagagagggaacgttactccgtggggag
cataacattctgggtgaagcatttcttgttatggcttctgcagcaggagctcaacagcag
caagaagttcttgcttggttgctggagccattgagccaacagtggatccagtcagagtgg
cagaattgctatctatcagaccctatgggtctcgttcgtttgtgctccaacacccccttc
atgtggtctttgttccacactgttacattctttgagaaggcactcaagagaagtggacat
agaaaaaccaacttgaatacgacctcagtaacaagtcaagatttgcatcctatggctcat
catctttcttggatgttgccacctctcctaaaacttctccgtgttatccattctctctgg
tctccgtcagtatatcaaacactacccccggagatgagggcagctatgacaatggctgat
gttgagcgatacagtctccttggggaagcaattcctaaattttcaaaagtctcctcggtt
tatgctgatggatcttttgatggtggtaaagaaggactaactgaggcaaacgaatctgat
gtgcgaaattggttgaaaggtatccgagatagcggatactgtgtgttgggtctatcagca
acaatcggagatacattcttcaaatgcctagatgctaactatgtcgcagtagcactcatg
gagaacttacagtcaatggagttcaggcacatgcgacagcttattcattcctttgtagtt
tatgtagtgaaatcttgtccggcagatatgtgggagtcatggcttgaagttctcctgcac
ccactatttattcattgtcagaaagctattagctcctcttgggccagtcttatgcgtgag
ggcagagcacaggttccagattcgtttggtgtacaaaatggaccggacatgaaacttgaa
gtaatggaagaaaaactgctgagggatctaactagggagattgccaacctcctttcaaca
atggcttctcctggtttaaatccagggcttcctgttttggagcattcaggccctgtggga
cgtattgacgtgtcttctcccaaggatttgcttgccttcaaatccaactctatggttggt
tacctcctgaatcacaaaaacgtggctctcccagctctgcaattctgtttggaagtattt
acatggacagatggggaaacaaccactaaagtctgttgcttttgtggtgtggttgttctt
ctaacgatcctgacaaacaacgttgagctcagagaatttgtgtcaaaagatttgttttct
gcggtcattagaggcttagccatggagtcaaatgccgttaacagtgctgatctagttaat
ctatgccgtgaaatatttatctatctctctgacagagacccagctccccgccaggttttg
ctttcacttccttgtctcacacccaacgacttgcgtgctttcgaagaagctgtggggaaa
actccaagtcccaaagaacagaagcaactcatgaggagtttgttgctgttaggtacaggg
aacaacttaagagcacttgctgctcaaaagaccatgaatgtcatcaccaacgtcacttta
aggacacgaggaccagcaagtacttccgaagctaaagaagacgaaggggaaacaatcggg
ctggcaagtgttttgtga

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