KEGG   Raphanus sativus (radish): 108855291Help
Entry
108855291         CDS       T06014                                 

Definition
(RefSeq) methionine--tRNA ligase, cytoplasmic
  KO
K01874  methionyl-tRNA synthetase [EC:6.1.1.10]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz00450  Selenocompound metabolism
rsz00970  Aminoacyl-tRNA biosynthesis
rsz01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    108855291
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    108855291
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rsz01007]
    108855291
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rsz03016]
    108855291
Enzymes [BR:rsz01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.10  methionine---tRNA ligase
     108855291
Amino acid related enzymes [BR:rsz01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   108855291
Transfer RNA biogenesis [BR:rsz03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    108855291
 Prokaryotic type
   Other AARSs
    108855291
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: tRNA-synt_1g tRNA_bind tRNA-synt_1 Anticodon_1 tRNA-synt_1e DUF5507
Motif
Other DBs
NCBI-GeneID: 108855291
NCBI-ProteinID: XP_018484569
Position
Unknown
AA seq 792 aa AA seqDB search
MEDGESCPKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYI
CGTDEYGTATETKALEENCTPKEICDKYHAIHKEVYDWFDISFDKFGRTSTPEQTQVCQA
IFNKLFENNFLSENTMQQLYCDTCQKFLADRLVEGSCPFPECNYDSARGDQCEKCGKLLN
PTELKDPRCKVCRTTPRIRDTDHLFIELPLLKDRLEKYIDDTSVTGSWSQNAIQTTKAWL
KEGLRQRCITRDLKWGVPVPHEKYKEKVFYVWFDAPIGYVSITSCYTSEWEKWWKNPENV
ELYQFMGKDNVPFHTVMFPSTQLGTGENWTLMKTISVTEYLNYESGKFSKSKGVGVFGND
VKDTNIPVEVWRYYLLTNRPEVSDTLFLWGDLQAKLTGELLNNLGNFVNRVLSFIAKPEP
AGYGSIIPDAPGAESHPLTKSLAEKVGKLVEEYVQAMEKVKLKQGLKTAMTISNEGNWYL
QETQFWKLFKEDKPSCAIVIRTAAGLVYLLAQILEPFMPSFSREVFKQLNLPLHFSLSDE
GIASRLWEILPPGHKIGTPKPLFKELTDEEVQQYKDKFAGSQADRRDRDVEAANMAEQLK
KTKLSDAKKQKASKGAGTSKSQPAATLEITMARLDIRVGKILKAEKHPNADSLYVEQIDV
GGGEIRTVVSGLVKYIPLEEMQNRMVCVLCNLKPSKMRDIMSQAMVLAASSSDGSKVELV
EPPESAMIGERVRFAGHEGEPDVVLNPKKKVWETLLVDLNTNENLVACYKDLPFTTDAGV
CKVSSISNGTIR
NT seq 2379 nt NT seq  +upstreamnt  +downstreamnt
atggaagacggagaaagctgccccaagctaccgattcctgggaagagaaacatactaatc
accagtgccttgccttatgtcaacaacgtccctcatctcggaaacatcatcggatgtgtt
ctgagtgcagatgtgtatgcaagatactgccgtctccgtggctataatgcgatatatatc
tgtggaacagatgaatacggtactgcaactgagaccaaagctcttgaggagaattgcact
cccaaggaaatctgtgacaagtaccatgccattcataaagaagtttatgactggttcgat
atcagttttgacaaatttggccggacttcaactccagagcagacgcaagtgtgccaagca
attttcaacaagttgttcgaaaacaacttcctttctgagaacaccatgcagcagctttac
tgcgatacatgccagaagttcttagctgaccggcttgttgagggctcttgtccttttcca
gaatgtaattatgattctgctcgtggagatcagtgcgaaaaatgtgggaagctcctgaat
cctactgaactcaaagatccgaggtgcaaggtctgtcgaactacaccccgaattcgcgac
acagaccacctgtttattgagcttccattgctcaaagataggttggaaaagtatattgac
gatacttctgttactggatcttggagtcaaaacgctattcaaacgacaaaagcatggctt
aaggaagggctaagacagagatgcattacaagagatctaaagtggggagttcctgttcca
catgagaaatataaggaaaaagtcttttacgtctggtttgatgctcctattggatacgtc
tcaataacgtcatgctacacgtctgaatgggagaagtggtggaagaatcctgagaatgtg
gagctttatcagtttatggggaaagataatgtgccgtttcatactgtaatgtttccatct
acgcagcttggaactggggaaaattggacactgatgaagacaatcagtgtgactgagtat
ttaaattacgaatctggaaagttctccaagagcaaaggtgttggagtgtttggtaatgat
gtaaaagatacaaatatccctgtcgaagtatggagatactacttgctgaccaacaggcct
gaggtgtctgacacattatttttatggggcgatttgcaagcaaaactgactggcgagttg
ctgaacaacctaggaaacttcgttaatcgagttctgagttttatagcaaagcctgagcct
gcaggttatggatctatcattcctgatgctcctggtgctgaatctcatcctctaacgaaa
tccctggctgaaaaggttggaaagttggtagaggagtatgttcaagccatggaaaaggtt
aagctcaagcaggggctgaaaactgctatgaccatctcgaatgaagggaactggtacttg
caggaaacccaattttggaaacttttcaaggaagacaaaccttcttgtgcaattgtcata
agaactgctgctggtttagtgtaccttcttgcacagatattagaacctttcatgccgtcc
ttttctcgagaggtatttaaacagctaaatttgcctctacatttttcgctctccgacgag
ggaatagcaagtagactttgggagatactacctcccggtcacaagataggcaccccaaaa
ccattgttcaaggaattgacagatgaagaagtgcaacagtacaaggataagtttgctgga
agtcaagctgatagacgtgatagggatgtagaagcagcaaatatggcagagcagcttaag
aaaacaaaactttcagatgcaaagaagcaaaaggcctcaaaaggagcgggaacatccaaa
tctcagccggctgccactcttgaaattactatggcaagacttgatattcgagtcggtaaa
attctgaaggctgagaagcatcctaacgcagattctttgtatgtggaacaaattgatgtt
ggaggaggcgaaattcgcaccgttgttagtggactggtcaaatatataccgcttgaggag
atgcagaaccgtatggtctgtgtgctttgcaacttgaagccctcgaaaatgagggatatt
atgtcacaagcaatggttcttgccgcttccagtagtgacggcagcaaggtggagttagtc
gagcccccggaatctgctatgattggtgaacgagttagatttgctgggcatgaaggtgag
ccagatgttgtgttaaacccaaagaagaaagtatgggagacgcttttggtggatcttaac
acgaacgagaacctagttgcttgctacaaagatttaccctttactacagatgcaggtgtc
tgcaaggtttcatccatcagcaatggcacaatccgttaa

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