KEGG   Raphanus sativus (radish): 108857590
Entry
108857590         CDS       T06014                                 
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP
  KO
K09561  STIP1 homology and U-box containing protein 1 [EC:2.3.2.27]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04120  Ubiquitin mediated proteolysis
rsz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108857590
   04120 Ubiquitin mediated proteolysis
    108857590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:rsz03110]
    108857590
   04131 Membrane trafficking [BR:rsz04131]
    108857590
   04121 Ubiquitin system [BR:rsz04121]
    108857590
Enzymes [BR:rsz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108857590
Chaperones and folding catalysts [BR:rsz03110]
 Other chaperones and cochaperones
  Others
   108857590
Membrane trafficking [BR:rsz04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    108857590
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  U-box type E3
   108857590
SSDB
Motif
Pfam: U-box TPR_1 TPR_2 TPR_11 TPR_16 ANAPC3 TPR_17 TPR_8 zf-NOSIP TPR_14 TPR_12 TPR_9 zf-Nse TPR_6
Other DBs
NCBI-GeneID: 108857590
NCBI-ProteinID: XP_018487088
UniProt: A0A6J0NTP0
Position
5:38577695..38580115
AA seq 283 aa
MVVTGAASAMAAKQAERLKEDGNSCFKKERFGAAIDAYTEAITLSPKVPVYWTNRALCHM
KRKDWTRVEEDCRKAVQLDHNSVKAHYMMGLSLLQREDYADGVKALQRALDLGRGANPTG
YMVEEIWEELAKAKYMEWELASARRSWELNSLKETCEAALNQQRALDMSRTDESSEEDYT
SHTERLKALDRVFEKAAEDDKPTEVPDYLCCNITLEIFRDPVISPSGVTYERAAILEHIN
KVGKFDPITREKLDPSKLVPNLAIKEAVASFLEKHVWAYKVGS
NT seq 852 nt   +upstreamnt  +downstreamnt
atggtggtgacaggcgcggcctccgccatggcggcaaaacaagcggagcggttaaaggaa
gacggtaacagttgtttcaagaaagagcgtttcggtgccgccattgacgcttacacggag
gcgataactttgtcaccaaaggttcctgtttactggacaaatcgagctctttgccacatg
aaacggaaggattggaccagggttgaagaggattgtcgcaaagctgttcagcttgatcac
aactccgtcaaggcccactacatgatgggactttcattactgcagagggaagattatgct
gatggagtcaaagcgttgcaaagggcattagatcttggaagaggcgcaaaccctacagga
tacatggttgaagaaatatgggaagagcttgctaaagctaaatacatggagtgggaactg
gcttctgctaggcgctcttgggaactgaatagtttgaaggaaacttgtgaagctgctctt
aatcaacaacgtgctttagacatgtctcgaacagacgagtcctcggaagaagactatact
tcccatactgagcgattgaaagctcttgatcgagtgtttgagaaagctgcagaagacgac
aaaccaactgaggtaccagattacttgtgttgcaatattactcttgagatattcagggat
cctgtgatatctccaagtggggttacatatgaaagagcagcaatccttgagcatattaac
aaggtggggaagtttgatcctataacgcgtgagaaactcgacccatcaaaactcgtacca
aatctggctatcaaagaggcagtggcatcttttctagagaagcacgtctgggcttacaaa
gtgggttcctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (29)   

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