KEGG   Raphanus sativus (radish): 108859926
Entry
108859926         CDS       T06014                                 
Name
(RefSeq) probable polygalacturonase At3g15720
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz00040  Pentose and glucuronate interconversions
rsz01100  Metabolic pathways
Module
rsz_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    108859926
Enzymes [BR:rsz01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     108859926
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 End_N_terminal
Other DBs
NCBI-GeneID: 108859926
NCBI-ProteinID: XP_018489326
UniProt: A0A6J0NYG2
Position
5:36609298..36611777
AA seq 453 aa
MQKKTWILNFSVFFLHIFTSSKALDVTQYGAIGDGVTDDSQAFLKAWEVVCSGTGDGQLI
VPAGMTFVLQPLKFQGSCKSTPIAVQILGNMVASSRGNWEGDKDQWILFSDIEGLVVEGN
GEINGQGSSWWEHKGSSRPTALKFKSCNNLRLSGLTHVDSAKAHIHINNCNGVSISNLRI
NAPESSPNTDGIDVAASSNVIIQDCVIATGDDCIAINSGTSNIRVSGIDCGPGHGISIGS
LGKDGETASVEDVCVQNCNFRGTTNGARIKTWPGGSGYARRITFNGITLDNVENPIIIDQ
HYNNGGSEKNTDDKSSAVEVSKVVYSNFVGTSKSEYGVDFRCSEAVPCTEIIMKDVRIET
ASSGSGQVAQGQCLNVRGVSTLAVPGLECLALSTDMLSLAELPEQTCMLPQPSVQPSTRP
MQDPFWVYGSGGKRLRVFNVVLTSFIFLVLYMF
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgcagaagaagacgtggatcttaaatttctcagtattctttctccatatctttacatct
tcgaaagcattggatgttactcaatacggagcaattggagatggagttacagacgattct
caggcgttcttgaaagcctgggaagttgtctgtagcgggacaggggatgggcagcttatc
gttccggcagggatgacatttgtgttacagcccttgaagtttcaaggttcttgcaaatcg
acccctattgctgttcagattttgggcaatatggttgcatcaagtagagggaactgggaa
ggagacaaagatcaatggattctcttctcagacatagaagggcttgtggttgaaggcaac
ggtgaaatcaacggccagggttcgagctggtgggaacacaaaggcagctctagaccaacc
gcattgaagttcaagagctgcaacaaccttagactaagtggactaacgcacgtagatagt
gcaaaggctcacattcacataaacaattgtaacggtgtgagcatctcaaatctccggata
aatgcaccggaatcaagtcctaacactgatggaatcgacgtcgctgcttcatccaatgtt
atcatccaggattgcgtaatcgccaccggtgacgattgcattgcgataaactcggggacg
tctaacatcagagtttccggtatagattgcggaccaggccatggaataagcataggaagc
ttggggaaagatggagagacagcttcagtggaggatgtatgtgtccagaactgtaacttt
cgaggaactacgaatggagctcggatcaaaacctggccgggaggatcaggttacgcaaga
aggattactttcaatggaattactctagataacgtggaaaacccgatcataatcgatcag
cattacaacaatggaggttctgagaaaaacacagatgataagtcatcggcggtggaagta
agcaaagtcgtgtatagtaatttcgtgggtacgtccaagtcagagtacggagttgacttt
aggtgtagcgaggctgtaccatgcaccgagattattatgaaagatgtgagaatagaaaca
gcatcatcaggatcaggacaagtcgcacaaggacagtgcttaaacgtgagaggtgtgtcc
actcttgccgtaccaggtttagaatgtttagcactttccacagatatgttatcattggcg
gagttgccggaacaaacttgtatgttgccgcaaccatcagtgcaaccaagtacacgaccg
atgcaggatccattttgggtttatggaagcggagggaaacgactcagagtttttaatgta
gtattaacttcatttatctttctggttttatatatgttttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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